Gene : Phvul.006G048100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31963:SF4 - F11F12.5 PROTEIN Genomic Order:  434
Name:  ? Phvul.006G048100 Secondary Identifier:  ? PAC:37173469
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G048100 0.5kb upstream 0.5kb upstream 6619 true Chr06: 15270950-15277568 Phaseolus vulgaris
Phvul.006G048100 0.5kb upstream 0.5kb upstream 500 false Chr06: 15270950-15271449 Phaseolus vulgaris
Phvul.006G048100 0.5kb downstream 0.5kb downstream 6619 true Chr06: 15271450-15278068 Phaseolus vulgaris
Phvul.006G048100 0.5kb downstream 0.5kb downstream 500 false Chr06: 15277569-15278068 Phaseolus vulgaris
Phvul.006G048100 1.0kb upstream 1.0kb upstream 7119 true Chr06: 15270450-15277568 Phaseolus vulgaris
Phvul.006G048100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15270450-15271449 Phaseolus vulgaris
Phvul.006G048100 1.0kb downstream 1.0kb downstream 7119 true Chr06: 15271450-15278568 Phaseolus vulgaris
Phvul.006G048100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15277569-15278568 Phaseolus vulgaris
Phvul.006G048100 2.0kb upstream 2.0kb upstream 8119 true Chr06: 15269450-15277568 Phaseolus vulgaris
Phvul.006G048100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15269450-15271449 Phaseolus vulgaris
Phvul.006G048100 2.0kb downstream 2.0kb downstream 8119 true Chr06: 15271450-15279568 Phaseolus vulgaris
Phvul.006G048100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15277569-15279568 Phaseolus vulgaris
Phvul.006G048100 5.0kb upstream 5.0kb upstream 11119 true Chr06: 15266450-15277568 Phaseolus vulgaris
Phvul.006G048100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15266450-15271449 Phaseolus vulgaris
Phvul.006G048100 5.0kb downstream 5.0kb downstream 11119 true Chr06: 15271450-15282568 Phaseolus vulgaris
Phvul.006G048100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15277569-15282568 Phaseolus vulgaris
Phvul.006G048100 10.0kb upstream 10.0kb upstream 16119 true Chr06: 15261450-15277568 Phaseolus vulgaris
Phvul.006G048100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15261450-15271449 Phaseolus vulgaris
Phvul.006G048100 10.0kb downstream 10.0kb downstream 16119 true Chr06: 15271450-15287568 Phaseolus vulgaris
Phvul.006G048100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15277569-15287568 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041284 5273 Angiosperm View MSA
122310899 5265 Fabidae View MSA
124067950 5270 Rosid View MSA
123751091 5271 Pentapetalae View MSA
122792359 5272 Eudicot View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7391 0.0 46.4424   High
cufflinks 2.77136 0.0 8.63446    
cufflinks 5.57396 0.0 16.1105    
cufflinks 6.2918 0.0 17.7826    
cufflinks 10.4398 0.0 28.2649    
cufflinks 2.36046 0.0 7.50416   Low
cufflinks 2.75819 0.0 8.57475    
cufflinks 1.74119 0.0 5.73753   Low
cufflinks 4.2754 0.0 12.634    
cufflinks 11.0211 0.0 29.7196    
cufflinks 9.44577 0.0 25.7785    

0 Strain