Gene : Phvul.010G103900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Genomic Order:  1045
Name:  ? Phvul.010G103900 Secondary Identifier:  ? PAC:37142534
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G103900 0.5kb upstream 0.5kb upstream 4265 true Chr10: 37334725-37338989 Phaseolus vulgaris
Phvul.010G103900 0.5kb upstream 0.5kb upstream 500 false Chr10: 37338490-37338989 Phaseolus vulgaris
Phvul.010G103900 0.5kb downstream 0.5kb downstream 4265 true Chr10: 37334225-37338489 Phaseolus vulgaris
Phvul.010G103900 0.5kb downstream 0.5kb downstream 500 false Chr10: 37334225-37334724 Phaseolus vulgaris
Phvul.010G103900 1.0kb upstream 1.0kb upstream 4765 true Chr10: 37334725-37339489 Phaseolus vulgaris
Phvul.010G103900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37338490-37339489 Phaseolus vulgaris
Phvul.010G103900 1.0kb downstream 1.0kb downstream 4765 true Chr10: 37333725-37338489 Phaseolus vulgaris
Phvul.010G103900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37333725-37334724 Phaseolus vulgaris
Phvul.010G103900 2.0kb upstream 2.0kb upstream 5765 true Chr10: 37334725-37340489 Phaseolus vulgaris
Phvul.010G103900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37338490-37340489 Phaseolus vulgaris
Phvul.010G103900 2.0kb downstream 2.0kb downstream 5765 true Chr10: 37332725-37338489 Phaseolus vulgaris
Phvul.010G103900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37332725-37334724 Phaseolus vulgaris
Phvul.010G103900 5.0kb upstream 5.0kb upstream 8765 true Chr10: 37334725-37343489 Phaseolus vulgaris
Phvul.010G103900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37338490-37343489 Phaseolus vulgaris
Phvul.010G103900 5.0kb downstream 5.0kb downstream 8765 true Chr10: 37329725-37338489 Phaseolus vulgaris
Phvul.010G103900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37329725-37334724 Phaseolus vulgaris
Phvul.010G103900 10.0kb upstream 10.0kb upstream 13765 true Chr10: 37334725-37348489 Phaseolus vulgaris
Phvul.010G103900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37338490-37348489 Phaseolus vulgaris
Phvul.010G103900 10.0kb downstream 10.0kb downstream 13765 true Chr10: 37324725-37338489 Phaseolus vulgaris
Phvul.010G103900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37324725-37334724 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297875 5265 Fabidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.4895 0.0 68.5333   High
cufflinks 0.359468 0.0 1.34751 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.29102 0.0 1.11448 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0214174 0.0 0.103264 Low  
cufflinks 0.108934 0.0 0.447865 Low  
cufflinks 0.159143 0.0 0.633996 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0089267 0.0 0.047748 Low Low
cufflinks 0.0863859 0.0 0.364285 Low  

0 Strain