Gene : Phvul.006G050800 P. vulgaris v2.1
Defline:  (1 of 6) PTHR23344:SF8 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE PROTEIN-RELATED Genomic Order:  461
Name:  ? Phvul.006G050800 Secondary Identifier:  ? PAC:37173060
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7409 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G050800 0.5kb upstream 0.5kb upstream 8846 true Chr06: 15565960-15574805 Phaseolus vulgaris
Phvul.006G050800 0.5kb upstream 0.5kb upstream 500 false Chr06: 15565960-15566459 Phaseolus vulgaris
Phvul.006G050800 0.5kb downstream 0.5kb downstream 8846 true Chr06: 15566460-15575305 Phaseolus vulgaris
Phvul.006G050800 0.5kb downstream 0.5kb downstream 500 false Chr06: 15574806-15575305 Phaseolus vulgaris
Phvul.006G050800 1.0kb upstream 1.0kb upstream 9346 true Chr06: 15565460-15574805 Phaseolus vulgaris
Phvul.006G050800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15565460-15566459 Phaseolus vulgaris
Phvul.006G050800 1.0kb downstream 1.0kb downstream 9346 true Chr06: 15566460-15575805 Phaseolus vulgaris
Phvul.006G050800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15574806-15575805 Phaseolus vulgaris
Phvul.006G050800 2.0kb upstream 2.0kb upstream 10346 true Chr06: 15564460-15574805 Phaseolus vulgaris
Phvul.006G050800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15564460-15566459 Phaseolus vulgaris
Phvul.006G050800 2.0kb downstream 2.0kb downstream 10346 true Chr06: 15566460-15576805 Phaseolus vulgaris
Phvul.006G050800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15574806-15576805 Phaseolus vulgaris
Phvul.006G050800 5.0kb upstream 5.0kb upstream 13346 true Chr06: 15561460-15574805 Phaseolus vulgaris
Phvul.006G050800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15561460-15566459 Phaseolus vulgaris
Phvul.006G050800 5.0kb downstream 5.0kb downstream 13346 true Chr06: 15566460-15579805 Phaseolus vulgaris
Phvul.006G050800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15574806-15579805 Phaseolus vulgaris
Phvul.006G050800 10.0kb upstream 10.0kb upstream 18346 true Chr06: 15556460-15574805 Phaseolus vulgaris
Phvul.006G050800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15556460-15566459 Phaseolus vulgaris
Phvul.006G050800 10.0kb downstream 10.0kb downstream 18346 true Chr06: 15566460-15584805 Phaseolus vulgaris
Phvul.006G050800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15574806-15584805 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253968 5265 Fabidae View MSA
123996332 5270 Rosid View MSA
123570823 5271 Pentapetalae View MSA
122796977 5272 Eudicot View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56129 0.0 4.97758   Low
cufflinks 5.84396 0.0 16.1903   High
cufflinks 3.89153 0.0 11.1523    
cufflinks 2.08376 0.0 6.48003   Low
cufflinks 3.04223 0.0 9.06288    
cufflinks 5.96556 0.0 16.4945   High
cufflinks 2.35551 0.0 7.19627    
cufflinks 3.11001 0.0 9.13224    
cufflinks 2.66555 0.0 8.04448    
cufflinks 6.01831 0.0 16.6445   High
cufflinks 3.94287 0.0 11.4194    

0 Strain