Gene : Phvul.010G108300 P. vulgaris v2.1
Defline:  (1 of 2) K03236 - translation initiation factor 1A (EIF1A) Genomic Order:  1089
Name:  ? Phvul.010G108300 Secondary Identifier:  ? PAC:37144013
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G108300 0.5kb upstream 0.5kb upstream 2020 true Chr10: 38131678-38133697 Phaseolus vulgaris
Phvul.010G108300 0.5kb upstream 0.5kb upstream 500 false Chr10: 38131678-38132177 Phaseolus vulgaris
Phvul.010G108300 0.5kb downstream 0.5kb downstream 2020 true Chr10: 38132178-38134197 Phaseolus vulgaris
Phvul.010G108300 0.5kb downstream 0.5kb downstream 500 false Chr10: 38133698-38134197 Phaseolus vulgaris
Phvul.010G108300 1.0kb upstream 1.0kb upstream 2520 true Chr10: 38131178-38133697 Phaseolus vulgaris
Phvul.010G108300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38131178-38132177 Phaseolus vulgaris
Phvul.010G108300 1.0kb downstream 1.0kb downstream 2520 true Chr10: 38132178-38134697 Phaseolus vulgaris
Phvul.010G108300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38133698-38134697 Phaseolus vulgaris
Phvul.010G108300 2.0kb upstream 2.0kb upstream 3520 true Chr10: 38130178-38133697 Phaseolus vulgaris
Phvul.010G108300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38130178-38132177 Phaseolus vulgaris
Phvul.010G108300 2.0kb downstream 2.0kb downstream 3520 true Chr10: 38132178-38135697 Phaseolus vulgaris
Phvul.010G108300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38133698-38135697 Phaseolus vulgaris
Phvul.010G108300 5.0kb upstream 5.0kb upstream 6520 true Chr10: 38127178-38133697 Phaseolus vulgaris
Phvul.010G108300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38127178-38132177 Phaseolus vulgaris
Phvul.010G108300 5.0kb downstream 5.0kb downstream 6520 true Chr10: 38132178-38138697 Phaseolus vulgaris
Phvul.010G108300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38133698-38138697 Phaseolus vulgaris
Phvul.010G108300 10.0kb upstream 10.0kb upstream 11520 true Chr10: 38122178-38133697 Phaseolus vulgaris
Phvul.010G108300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38122178-38132177 Phaseolus vulgaris
Phvul.010G108300 10.0kb downstream 10.0kb downstream 11520 true Chr10: 38132178-38143697 Phaseolus vulgaris
Phvul.010G108300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38133698-38143697 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309063 5265 Fabidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 202.245 0.0 608.474 High High
cufflinks 69.5992 0.0 185.348 High  
cufflinks 38.9315 0.0 100.762 High  
cufflinks 221.549 0.0 671.994 High High
cufflinks 79.0373 0.0 213.048 High  
cufflinks 26.0014 0.0 67.3183   Low
cufflinks 44.1269 0.0 114.813 High  
cufflinks 36.9147 0.0 95.5388 High  
cufflinks 68.3647 0.0 182.263 High  
cufflinks 152.52 0.0 440.294 High  
cufflinks 97.8282 0.0 268.948 High  

0 Strain