Gene : Phvul.010G112200 P. vulgaris v2.1
Defline:  (1 of 2) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  1122
Name:  ? Phvul.010G112200 Secondary Identifier:  ? PAC:37143653
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G112200 0.5kb upstream 0.5kb upstream 4133 true Chr10: 38734266-38738398 Phaseolus vulgaris
Phvul.010G112200 0.5kb upstream 0.5kb upstream 500 false Chr10: 38737899-38738398 Phaseolus vulgaris
Phvul.010G112200 0.5kb downstream 0.5kb downstream 4133 true Chr10: 38733766-38737898 Phaseolus vulgaris
Phvul.010G112200 0.5kb downstream 0.5kb downstream 500 false Chr10: 38733766-38734265 Phaseolus vulgaris
Phvul.010G112200 1.0kb upstream 1.0kb upstream 4633 true Chr10: 38734266-38738898 Phaseolus vulgaris
Phvul.010G112200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38737899-38738898 Phaseolus vulgaris
Phvul.010G112200 1.0kb downstream 1.0kb downstream 4633 true Chr10: 38733266-38737898 Phaseolus vulgaris
Phvul.010G112200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38733266-38734265 Phaseolus vulgaris
Phvul.010G112200 2.0kb upstream 2.0kb upstream 5633 true Chr10: 38734266-38739898 Phaseolus vulgaris
Phvul.010G112200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38737899-38739898 Phaseolus vulgaris
Phvul.010G112200 2.0kb downstream 2.0kb downstream 5633 true Chr10: 38732266-38737898 Phaseolus vulgaris
Phvul.010G112200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38732266-38734265 Phaseolus vulgaris
Phvul.010G112200 5.0kb upstream 5.0kb upstream 8633 true Chr10: 38734266-38742898 Phaseolus vulgaris
Phvul.010G112200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38737899-38742898 Phaseolus vulgaris
Phvul.010G112200 5.0kb downstream 5.0kb downstream 8633 true Chr10: 38729266-38737898 Phaseolus vulgaris
Phvul.010G112200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38729266-38734265 Phaseolus vulgaris
Phvul.010G112200 10.0kb upstream 10.0kb upstream 13633 true Chr10: 38734266-38747898 Phaseolus vulgaris
Phvul.010G112200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38737899-38747898 Phaseolus vulgaris
Phvul.010G112200 10.0kb downstream 10.0kb downstream 13633 true Chr10: 38724266-38737898 Phaseolus vulgaris
Phvul.010G112200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38724266-38734265 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305734 5265 Fabidae View MSA
124063883 5270 Rosid View MSA
123739511 5271 Pentapetalae View MSA
122786347 5272 Eudicot View MSA
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.32628 0.0 16.021    
cufflinks 11.2252 0.0 31.3547    
cufflinks 77.9143 0.0 204.908 High High
cufflinks 5.30029 0.0 15.9536    
cufflinks 5.98887 0.0 17.896    
cufflinks 27.4525 0.0 71.681   High
cufflinks 1.37154 0.0 4.82222   Low
cufflinks 1.52932 0.0 5.30139   Low
cufflinks 1.35706 0.0 4.78727   Low
cufflinks 5.24193 0.0 15.8912    
cufflinks 5.91619 0.0 17.7323    

0 Strain