Gene : Phvul.006G053200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Genomic Order:  485
Name:  ? Phvul.006G053200 Secondary Identifier:  ? PAC:37171595
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G053200 0.5kb upstream 0.5kb upstream 4415 true Chr06: 15841203-15845617 Phaseolus vulgaris
Phvul.006G053200 0.5kb upstream 0.5kb upstream 500 false Chr06: 15841203-15841702 Phaseolus vulgaris
Phvul.006G053200 0.5kb downstream 0.5kb downstream 4415 true Chr06: 15841703-15846117 Phaseolus vulgaris
Phvul.006G053200 0.5kb downstream 0.5kb downstream 500 false Chr06: 15845618-15846117 Phaseolus vulgaris
Phvul.006G053200 1.0kb upstream 1.0kb upstream 4915 true Chr06: 15840703-15845617 Phaseolus vulgaris
Phvul.006G053200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15840703-15841702 Phaseolus vulgaris
Phvul.006G053200 1.0kb downstream 1.0kb downstream 4915 true Chr06: 15841703-15846617 Phaseolus vulgaris
Phvul.006G053200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15845618-15846617 Phaseolus vulgaris
Phvul.006G053200 2.0kb upstream 2.0kb upstream 5915 true Chr06: 15839703-15845617 Phaseolus vulgaris
Phvul.006G053200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15839703-15841702 Phaseolus vulgaris
Phvul.006G053200 2.0kb downstream 2.0kb downstream 5915 true Chr06: 15841703-15847617 Phaseolus vulgaris
Phvul.006G053200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15845618-15847617 Phaseolus vulgaris
Phvul.006G053200 5.0kb upstream 5.0kb upstream 8915 true Chr06: 15836703-15845617 Phaseolus vulgaris
Phvul.006G053200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15836703-15841702 Phaseolus vulgaris
Phvul.006G053200 5.0kb downstream 5.0kb downstream 8915 true Chr06: 15841703-15850617 Phaseolus vulgaris
Phvul.006G053200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15845618-15850617 Phaseolus vulgaris
Phvul.006G053200 10.0kb upstream 10.0kb upstream 13915 true Chr06: 15831703-15845617 Phaseolus vulgaris
Phvul.006G053200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15831703-15841702 Phaseolus vulgaris
Phvul.006G053200 10.0kb downstream 10.0kb downstream 13915 true Chr06: 15841703-15855617 Phaseolus vulgaris
Phvul.006G053200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15845618-15855617 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8413 0.0 59.7219    
cufflinks 20.5352 0.0 64.8205   High
cufflinks 10.8933 0.0 36.8664   Low
cufflinks 15.3068 0.0 49.4166    
cufflinks 17.7424 0.0 56.5141    
cufflinks 15.3 0.0 49.338    
cufflinks 16.1259 0.0 51.6993    
cufflinks 16.1615 0.0 51.6576    
cufflinks 16.7394 0.0 53.4865    
cufflinks 21.3846 0.0 67.3888   High
cufflinks 19.5978 0.0 62.1705    

0 Strain