Gene : Phvul.010G112900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10788//PTHR10788:SF39 - TREHALOSE-6-PHOSPHATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1129
Name:  ? Phvul.010G112900 Secondary Identifier:  ? PAC:37143656
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G112900 0.5kb upstream 0.5kb upstream 6188 true Chr10: 38810973-38817160 Phaseolus vulgaris
Phvul.010G112900 0.5kb upstream 0.5kb upstream 500 false Chr10: 38816661-38817160 Phaseolus vulgaris
Phvul.010G112900 0.5kb downstream 0.5kb downstream 6188 true Chr10: 38810473-38816660 Phaseolus vulgaris
Phvul.010G112900 0.5kb downstream 0.5kb downstream 500 false Chr10: 38810473-38810972 Phaseolus vulgaris
Phvul.010G112900 1.0kb upstream 1.0kb upstream 6688 true Chr10: 38810973-38817660 Phaseolus vulgaris
Phvul.010G112900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38816661-38817660 Phaseolus vulgaris
Phvul.010G112900 1.0kb downstream 1.0kb downstream 6688 true Chr10: 38809973-38816660 Phaseolus vulgaris
Phvul.010G112900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38809973-38810972 Phaseolus vulgaris
Phvul.010G112900 2.0kb upstream 2.0kb upstream 7688 true Chr10: 38810973-38818660 Phaseolus vulgaris
Phvul.010G112900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38816661-38818660 Phaseolus vulgaris
Phvul.010G112900 2.0kb downstream 2.0kb downstream 7688 true Chr10: 38808973-38816660 Phaseolus vulgaris
Phvul.010G112900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38808973-38810972 Phaseolus vulgaris
Phvul.010G112900 5.0kb upstream 5.0kb upstream 10688 true Chr10: 38810973-38821660 Phaseolus vulgaris
Phvul.010G112900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38816661-38821660 Phaseolus vulgaris
Phvul.010G112900 5.0kb downstream 5.0kb downstream 10688 true Chr10: 38805973-38816660 Phaseolus vulgaris
Phvul.010G112900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38805973-38810972 Phaseolus vulgaris
Phvul.010G112900 10.0kb upstream 10.0kb upstream 15688 true Chr10: 38810973-38826660 Phaseolus vulgaris
Phvul.010G112900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38816661-38826660 Phaseolus vulgaris
Phvul.010G112900 10.0kb downstream 10.0kb downstream 15688 true Chr10: 38800973-38816660 Phaseolus vulgaris
Phvul.010G112900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38800973-38810972 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312429 5265 Fabidae View MSA
124071618 5270 Rosid View MSA
123748006 5271 Pentapetalae View MSA
122793919 5272 Eudicot View MSA
122048868 5273 Angiosperm View MSA
121311146 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.401887 0.0 1.59506 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.102182 0.0 0.458592 Low  
cufflinks 0.0457239 0.0 0.223934 Low Low
cufflinks 0.0951778 0.0 0.428671 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0870388 0.0 0.401004 Low  

0 Strain