Gene : Phvul.006G055300 P. vulgaris v2.1
Defline:  (1 of 2) K02946 - small subunit ribosomal protein S10 (RP-S10, MRPS10, rpsJ) Genomic Order:  510
Name:  ? Phvul.006G055300 Secondary Identifier:  ? PAC:37171901
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G055300 0.5kb upstream 0.5kb upstream 2506 true Chr06: 16163158-16165663 Phaseolus vulgaris
Phvul.006G055300 0.5kb upstream 0.5kb upstream 500 false Chr06: 16165164-16165663 Phaseolus vulgaris
Phvul.006G055300 0.5kb downstream 0.5kb downstream 2506 true Chr06: 16162658-16165163 Phaseolus vulgaris
Phvul.006G055300 0.5kb downstream 0.5kb downstream 500 false Chr06: 16162658-16163157 Phaseolus vulgaris
Phvul.006G055300 1.0kb upstream 1.0kb upstream 3006 true Chr06: 16163158-16166163 Phaseolus vulgaris
Phvul.006G055300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16165164-16166163 Phaseolus vulgaris
Phvul.006G055300 1.0kb downstream 1.0kb downstream 3006 true Chr06: 16162158-16165163 Phaseolus vulgaris
Phvul.006G055300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16162158-16163157 Phaseolus vulgaris
Phvul.006G055300 2.0kb upstream 2.0kb upstream 4006 true Chr06: 16163158-16167163 Phaseolus vulgaris
Phvul.006G055300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16165164-16167163 Phaseolus vulgaris
Phvul.006G055300 2.0kb downstream 2.0kb downstream 4006 true Chr06: 16161158-16165163 Phaseolus vulgaris
Phvul.006G055300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16161158-16163157 Phaseolus vulgaris
Phvul.006G055300 5.0kb upstream 5.0kb upstream 7006 true Chr06: 16163158-16170163 Phaseolus vulgaris
Phvul.006G055300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16165164-16170163 Phaseolus vulgaris
Phvul.006G055300 5.0kb downstream 5.0kb downstream 7006 true Chr06: 16158158-16165163 Phaseolus vulgaris
Phvul.006G055300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16158158-16163157 Phaseolus vulgaris
Phvul.006G055300 10.0kb upstream 10.0kb upstream 12006 true Chr06: 16163158-16175163 Phaseolus vulgaris
Phvul.006G055300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16165164-16175163 Phaseolus vulgaris
Phvul.006G055300 10.0kb downstream 10.0kb downstream 12006 true Chr06: 16153158-16165163 Phaseolus vulgaris
Phvul.006G055300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16153158-16163157 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026497 5273 Angiosperm View MSA
122306608 5265 Fabidae View MSA
124068584 5270 Rosid View MSA
123745585 5271 Pentapetalae View MSA
122786929 5272 Eudicot View MSA
121343916 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.6877 0.0 133.654 High  
cufflinks 41.7096 0.0 108.376 High  
cufflinks 250.514 0.0 711.156 High High
cufflinks 35.7705 0.0 93.4308 High  
cufflinks 24.2687 0.0 65.1103    
cufflinks 151.367 0.0 408.088 High High
cufflinks 5.287 0.0 16.5428   Low
cufflinks 13.0784 0.0 37.066    
cufflinks 5.15602 0.0 16.1863   Low
cufflinks 12.3643 0.0 35.1661    
cufflinks 18.8471 0.0 51.7208    

0 Strain