Gene : Phvul.006G055500 P. vulgaris v2.1
Defline:  (1 of 2) PF01426//PF05641 - BAH domain (BAH) // Agenet domain (Agenet) Genomic Order:  512
Name:  ? Phvul.006G055500 Secondary Identifier:  ? PAC:37172082
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G055500 0.5kb upstream 0.5kb upstream 6579 true Chr06: 16172303-16178881 Phaseolus vulgaris
Phvul.006G055500 0.5kb upstream 0.5kb upstream 500 false Chr06: 16178382-16178881 Phaseolus vulgaris
Phvul.006G055500 0.5kb downstream 0.5kb downstream 6579 true Chr06: 16171803-16178381 Phaseolus vulgaris
Phvul.006G055500 0.5kb downstream 0.5kb downstream 500 false Chr06: 16171803-16172302 Phaseolus vulgaris
Phvul.006G055500 1.0kb upstream 1.0kb upstream 7079 true Chr06: 16172303-16179381 Phaseolus vulgaris
Phvul.006G055500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16178382-16179381 Phaseolus vulgaris
Phvul.006G055500 1.0kb downstream 1.0kb downstream 7079 true Chr06: 16171303-16178381 Phaseolus vulgaris
Phvul.006G055500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16171303-16172302 Phaseolus vulgaris
Phvul.006G055500 2.0kb upstream 2.0kb upstream 8079 true Chr06: 16172303-16180381 Phaseolus vulgaris
Phvul.006G055500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16178382-16180381 Phaseolus vulgaris
Phvul.006G055500 2.0kb downstream 2.0kb downstream 8079 true Chr06: 16170303-16178381 Phaseolus vulgaris
Phvul.006G055500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16170303-16172302 Phaseolus vulgaris
Phvul.006G055500 5.0kb upstream 5.0kb upstream 11079 true Chr06: 16172303-16183381 Phaseolus vulgaris
Phvul.006G055500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16178382-16183381 Phaseolus vulgaris
Phvul.006G055500 5.0kb downstream 5.0kb downstream 11079 true Chr06: 16167303-16178381 Phaseolus vulgaris
Phvul.006G055500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16167303-16172302 Phaseolus vulgaris
Phvul.006G055500 10.0kb upstream 10.0kb upstream 16079 true Chr06: 16172303-16188381 Phaseolus vulgaris
Phvul.006G055500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16178382-16188381 Phaseolus vulgaris
Phvul.006G055500 10.0kb downstream 10.0kb downstream 16079 true Chr06: 16162303-16178381 Phaseolus vulgaris
Phvul.006G055500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16162303-16172302 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302137 5265 Fabidae View MSA
124060613 5270 Rosid View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0386 0.0 36.0167   Low
cufflinks 17.0502 0.0 51.3213    
cufflinks 17.7489 0.0 57.4742    
cufflinks 8.83832 0.0 29.6259   Low
cufflinks 13.6178 0.0 45.9814    
cufflinks 21.3871 0.0 70.516   High
cufflinks 17.0769 0.0 54.9519    
cufflinks 19.1322 0.0 57.2873    
cufflinks 16.171 0.0 52.2144    
cufflinks 18.2889 0.0 54.6178    
cufflinks 16.0766 0.0 46.8629    

0 Strain