Gene : Phvul.010G114500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10666//PTHR10666:SF138 - UBIQUITIN // SUBFAMILY NOT NAMED Genomic Order:  1146
Name:  ? Phvul.010G114500 Secondary Identifier:  ? PAC:37142452
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6351 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6352 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G114500 0.5kb upstream 0.5kb upstream 3648 true Chr10: 39105641-39109288 Phaseolus vulgaris
Phvul.010G114500 0.5kb upstream 0.5kb upstream 500 false Chr10: 39105641-39106140 Phaseolus vulgaris
Phvul.010G114500 0.5kb downstream 0.5kb downstream 3648 true Chr10: 39106141-39109788 Phaseolus vulgaris
Phvul.010G114500 0.5kb downstream 0.5kb downstream 500 false Chr10: 39109289-39109788 Phaseolus vulgaris
Phvul.010G114500 1.0kb upstream 1.0kb upstream 4148 true Chr10: 39105141-39109288 Phaseolus vulgaris
Phvul.010G114500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39105141-39106140 Phaseolus vulgaris
Phvul.010G114500 1.0kb downstream 1.0kb downstream 4148 true Chr10: 39106141-39110288 Phaseolus vulgaris
Phvul.010G114500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39109289-39110288 Phaseolus vulgaris
Phvul.010G114500 2.0kb upstream 2.0kb upstream 5148 true Chr10: 39104141-39109288 Phaseolus vulgaris
Phvul.010G114500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39104141-39106140 Phaseolus vulgaris
Phvul.010G114500 2.0kb downstream 2.0kb downstream 5148 true Chr10: 39106141-39111288 Phaseolus vulgaris
Phvul.010G114500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39109289-39111288 Phaseolus vulgaris
Phvul.010G114500 5.0kb upstream 5.0kb upstream 8148 true Chr10: 39101141-39109288 Phaseolus vulgaris
Phvul.010G114500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39101141-39106140 Phaseolus vulgaris
Phvul.010G114500 5.0kb downstream 5.0kb downstream 8148 true Chr10: 39106141-39114288 Phaseolus vulgaris
Phvul.010G114500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39109289-39114288 Phaseolus vulgaris
Phvul.010G114500 10.0kb upstream 10.0kb upstream 13148 true Chr10: 39096141-39109288 Phaseolus vulgaris
Phvul.010G114500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39096141-39106140 Phaseolus vulgaris
Phvul.010G114500 10.0kb downstream 10.0kb downstream 13148 true Chr10: 39106141-39119288 Phaseolus vulgaris
Phvul.010G114500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39109289-39119288 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0551 0.0 33.8008    
cufflinks 14.0998 0.0 36.4924    
cufflinks 10.4754 0.0 27.3115   Low
cufflinks 12.8132 0.0 33.3076    
cufflinks 9.96371 0.0 26.1048   Low
cufflinks 16.6523 0.0 43.0431    
cufflinks 27.5849 0.0 72.1652   High
cufflinks 14.4931 0.0 37.4764    
cufflinks 21.4364 0.0 55.5205   High
cufflinks 14.821 0.0 38.335    
cufflinks 15.7076 0.0 40.6197    

0 Strain