Gene : Phvul.006G039200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31355:SF7 - MICROTUBULE-ASSOCIATED PROTEIN SPIRAL2-LIKE-RELATED Genomic Order:  338
Name:  ? Phvul.006G039200 Secondary Identifier:  ? PAC:37173901
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G039200 0.5kb upstream 0.5kb upstream 7832 true Chr06: 13894082-13901913 Phaseolus vulgaris
Phvul.006G039200 0.5kb upstream 0.5kb upstream 500 false Chr06: 13901414-13901913 Phaseolus vulgaris
Phvul.006G039200 0.5kb downstream 0.5kb downstream 7832 true Chr06: 13893582-13901413 Phaseolus vulgaris
Phvul.006G039200 0.5kb downstream 0.5kb downstream 500 false Chr06: 13893582-13894081 Phaseolus vulgaris
Phvul.006G039200 1.0kb upstream 1.0kb upstream 8332 true Chr06: 13894082-13902413 Phaseolus vulgaris
Phvul.006G039200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13901414-13902413 Phaseolus vulgaris
Phvul.006G039200 1.0kb downstream 1.0kb downstream 8332 true Chr06: 13893082-13901413 Phaseolus vulgaris
Phvul.006G039200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13893082-13894081 Phaseolus vulgaris
Phvul.006G039200 2.0kb upstream 2.0kb upstream 9332 true Chr06: 13894082-13903413 Phaseolus vulgaris
Phvul.006G039200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13901414-13903413 Phaseolus vulgaris
Phvul.006G039200 2.0kb downstream 2.0kb downstream 9332 true Chr06: 13892082-13901413 Phaseolus vulgaris
Phvul.006G039200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13892082-13894081 Phaseolus vulgaris
Phvul.006G039200 5.0kb upstream 5.0kb upstream 12332 true Chr06: 13894082-13906413 Phaseolus vulgaris
Phvul.006G039200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13901414-13906413 Phaseolus vulgaris
Phvul.006G039200 5.0kb downstream 5.0kb downstream 12332 true Chr06: 13889082-13901413 Phaseolus vulgaris
Phvul.006G039200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13889082-13894081 Phaseolus vulgaris
Phvul.006G039200 10.0kb upstream 10.0kb upstream 17332 true Chr06: 13894082-13911413 Phaseolus vulgaris
Phvul.006G039200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13901414-13911413 Phaseolus vulgaris
Phvul.006G039200 10.0kb downstream 10.0kb downstream 17332 true Chr06: 13884082-13901413 Phaseolus vulgaris
Phvul.006G039200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13884082-13894081 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308008 5265 Fabidae View MSA
124068747 5270 Rosid View MSA
123740054 5271 Pentapetalae View MSA
122795773 5272 Eudicot View MSA
122043238 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6225 0.0 13.307   Low
cufflinks 9.39349 0.0 30.1811    
cufflinks 10.2003 0.0 28.3777    
cufflinks 5.28417 0.0 18.0014   Low
cufflinks 13.5595 0.0 43.4372    
cufflinks 11.1858 0.0 35.8344    
cufflinks 9.13416 0.0 29.3381    
cufflinks 7.41045 0.0 24.2433    
cufflinks 9.95822 0.0 27.7344    
cufflinks 12.5922 0.0 40.2781    
cufflinks 15.3288 0.0 49.7458   High

0 Strain