Gene : Phvul.006G039400 P. vulgaris v2.1
Defline:  (1 of 2) K02335 - DNA polymerase I (DPO1, polA) Genomic Order:  336
Name:  ? Phvul.006G039400 Secondary Identifier:  ? PAC:37171744
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G039400 0.5kb upstream 0.5kb upstream 12808 true Chr06: 13858913-13871720 Phaseolus vulgaris
Phvul.006G039400 0.5kb upstream 0.5kb upstream 500 false Chr06: 13858913-13859412 Phaseolus vulgaris
Phvul.006G039400 0.5kb downstream 0.5kb downstream 12808 true Chr06: 13859413-13872220 Phaseolus vulgaris
Phvul.006G039400 0.5kb downstream 0.5kb downstream 500 false Chr06: 13871721-13872220 Phaseolus vulgaris
Phvul.006G039400 1.0kb upstream 1.0kb upstream 13308 true Chr06: 13858413-13871720 Phaseolus vulgaris
Phvul.006G039400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13858413-13859412 Phaseolus vulgaris
Phvul.006G039400 1.0kb downstream 1.0kb downstream 13308 true Chr06: 13859413-13872720 Phaseolus vulgaris
Phvul.006G039400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13871721-13872720 Phaseolus vulgaris
Phvul.006G039400 2.0kb upstream 2.0kb upstream 14308 true Chr06: 13857413-13871720 Phaseolus vulgaris
Phvul.006G039400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13857413-13859412 Phaseolus vulgaris
Phvul.006G039400 2.0kb downstream 2.0kb downstream 14308 true Chr06: 13859413-13873720 Phaseolus vulgaris
Phvul.006G039400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13871721-13873720 Phaseolus vulgaris
Phvul.006G039400 5.0kb upstream 5.0kb upstream 17308 true Chr06: 13854413-13871720 Phaseolus vulgaris
Phvul.006G039400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13854413-13859412 Phaseolus vulgaris
Phvul.006G039400 5.0kb downstream 5.0kb downstream 17308 true Chr06: 13859413-13876720 Phaseolus vulgaris
Phvul.006G039400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13871721-13876720 Phaseolus vulgaris
Phvul.006G039400 10.0kb upstream 10.0kb upstream 22308 true Chr06: 13849413-13871720 Phaseolus vulgaris
Phvul.006G039400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13849413-13859412 Phaseolus vulgaris
Phvul.006G039400 10.0kb downstream 10.0kb downstream 22308 true Chr06: 13859413-13881720 Phaseolus vulgaris
Phvul.006G039400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13871721-13881720 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296687 5265 Fabidae View MSA
124065087 5270 Rosid View MSA
123749681 5271 Pentapetalae View MSA
122789889 5272 Eudicot View MSA
122045132 5273 Angiosperm View MSA
121346296 5274 Embryophyte View MSA
123424126 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.05017 0.0 5.92933   Low
cufflinks 4.11828 0.0 11.1651    
cufflinks 1.55827 0.0 4.62919   Low
cufflinks 1.85695 0.0 5.48882   Low
cufflinks 4.02427 0.0 10.9993    
cufflinks 3.44377 0.0 9.47096    
cufflinks 6.43925 0.0 16.9133   High
cufflinks 5.76655 0.0 15.1965    
cufflinks 5.22806 0.0 13.9391    
cufflinks 7.78838 0.0 20.2795   High
cufflinks 4.33193 0.0 11.7506    

0 Strain