Gene : Phvul.006G038300 P. vulgaris v2.1
Defline:  (1 of 1) PF14780 - Domain of unknown function (DUF4477) (DUF4477) Genomic Order:  348
Name:  ? Phvul.006G038300 Secondary Identifier:  ? PAC:37173359
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G038300 0.5kb upstream 0.5kb upstream 5224 true Chr06: 13973005-13978228 Phaseolus vulgaris
Phvul.006G038300 0.5kb upstream 0.5kb upstream 500 false Chr06: 13973005-13973504 Phaseolus vulgaris
Phvul.006G038300 0.5kb downstream 0.5kb downstream 5224 true Chr06: 13973505-13978728 Phaseolus vulgaris
Phvul.006G038300 0.5kb downstream 0.5kb downstream 500 false Chr06: 13978229-13978728 Phaseolus vulgaris
Phvul.006G038300 1.0kb upstream 1.0kb upstream 5724 true Chr06: 13972505-13978228 Phaseolus vulgaris
Phvul.006G038300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13972505-13973504 Phaseolus vulgaris
Phvul.006G038300 1.0kb downstream 1.0kb downstream 5724 true Chr06: 13973505-13979228 Phaseolus vulgaris
Phvul.006G038300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13978229-13979228 Phaseolus vulgaris
Phvul.006G038300 2.0kb upstream 2.0kb upstream 6724 true Chr06: 13971505-13978228 Phaseolus vulgaris
Phvul.006G038300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13971505-13973504 Phaseolus vulgaris
Phvul.006G038300 2.0kb downstream 2.0kb downstream 6724 true Chr06: 13973505-13980228 Phaseolus vulgaris
Phvul.006G038300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13978229-13980228 Phaseolus vulgaris
Phvul.006G038300 5.0kb upstream 5.0kb upstream 9724 true Chr06: 13968505-13978228 Phaseolus vulgaris
Phvul.006G038300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13968505-13973504 Phaseolus vulgaris
Phvul.006G038300 5.0kb downstream 5.0kb downstream 9724 true Chr06: 13973505-13983228 Phaseolus vulgaris
Phvul.006G038300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13978229-13983228 Phaseolus vulgaris
Phvul.006G038300 10.0kb upstream 10.0kb upstream 14724 true Chr06: 13963505-13978228 Phaseolus vulgaris
Phvul.006G038300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13963505-13973504 Phaseolus vulgaris
Phvul.006G038300 10.0kb downstream 10.0kb downstream 14724 true Chr06: 13973505-13988228 Phaseolus vulgaris
Phvul.006G038300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13978229-13988228 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303642 5265 Fabidae View MSA
124069189 5270 Rosid View MSA
123741909 5271 Pentapetalae View MSA
122794147 5272 Eudicot View MSA
122045884 5273 Angiosperm View MSA
121347885 5274 Embryophyte View MSA
123380665 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.22194 0.0 15.9894    
cufflinks 8.29857 0.0 26.9307   High
cufflinks 7.65655 0.0 27.1564   High
cufflinks 4.42145 0.0 16.6131    
cufflinks 4.45028 0.0 16.7711    
cufflinks 6.28156 0.0 21.5803    
cufflinks 5.47749 0.0 19.3699    
cufflinks 4.80249 0.0 17.4764    
cufflinks 3.59187 0.0 14.1691   Low
cufflinks 5.81266 0.0 20.3765    
cufflinks 4.60216 0.0 17.133    

0 Strain