Gene : Phvul.010G096200 P. vulgaris v2.1
Defline:  (1 of 1) K15440 - tRNA-specific adenosine deaminase 1 [EC:3.5.4.34] (TAD1, ADAT1) Genomic Order:  964
Name:  ? Phvul.010G096200 Secondary Identifier:  ? PAC:37142920
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G096200 0.5kb upstream 0.5kb upstream 4424 true Chr10: 36069527-36073950 Phaseolus vulgaris
Phvul.010G096200 0.5kb upstream 0.5kb upstream 500 false Chr10: 36073451-36073950 Phaseolus vulgaris
Phvul.010G096200 0.5kb downstream 0.5kb downstream 4424 true Chr10: 36069027-36073450 Phaseolus vulgaris
Phvul.010G096200 0.5kb downstream 0.5kb downstream 500 false Chr10: 36069027-36069526 Phaseolus vulgaris
Phvul.010G096200 1.0kb upstream 1.0kb upstream 4924 true Chr10: 36069527-36074450 Phaseolus vulgaris
Phvul.010G096200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36073451-36074450 Phaseolus vulgaris
Phvul.010G096200 1.0kb downstream 1.0kb downstream 4924 true Chr10: 36068527-36073450 Phaseolus vulgaris
Phvul.010G096200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36068527-36069526 Phaseolus vulgaris
Phvul.010G096200 2.0kb upstream 2.0kb upstream 5924 true Chr10: 36069527-36075450 Phaseolus vulgaris
Phvul.010G096200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36073451-36075450 Phaseolus vulgaris
Phvul.010G096200 2.0kb downstream 2.0kb downstream 5924 true Chr10: 36067527-36073450 Phaseolus vulgaris
Phvul.010G096200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36067527-36069526 Phaseolus vulgaris
Phvul.010G096200 5.0kb upstream 5.0kb upstream 8924 true Chr10: 36069527-36078450 Phaseolus vulgaris
Phvul.010G096200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36073451-36078450 Phaseolus vulgaris
Phvul.010G096200 5.0kb downstream 5.0kb downstream 8924 true Chr10: 36064527-36073450 Phaseolus vulgaris
Phvul.010G096200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36064527-36069526 Phaseolus vulgaris
Phvul.010G096200 10.0kb upstream 10.0kb upstream 13924 true Chr10: 36069527-36083450 Phaseolus vulgaris
Phvul.010G096200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36073451-36083450 Phaseolus vulgaris
Phvul.010G096200 10.0kb downstream 10.0kb downstream 13924 true Chr10: 36059527-36073450 Phaseolus vulgaris
Phvul.010G096200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36059527-36069526 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306991 5265 Fabidae View MSA
124068273 5270 Rosid View MSA
123741419 5271 Pentapetalae View MSA
122786096 5272 Eudicot View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.866929 0.0 6.0625   Low
cufflinks 1.98217 0.0 10.6581   High
cufflinks 1.43625 0.0 8.57996    
cufflinks 1.7339 0.0 9.96084    
cufflinks 1.67074 0.0 11.0515    
cufflinks 1.98128 0.0 10.758   High
cufflinks 1.39974 0.0 6.92767    
cufflinks 1.66406 0.0 10.7492    
cufflinks 0.795349 0.0 5.58848   Low
cufflinks 1.57184 0.0 10.5631    
cufflinks 1.37348 0.0 6.98836    

0 Strain