Gene : Phvul.006G042000 P. vulgaris v2.1
Defline:  (1 of 4) PF13968 - Domain of unknown function (DUF4220) (DUF4220) Genomic Order:  312
Name:  ? Phvul.006G042000 Secondary Identifier:  ? PAC:37172493
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G042000 0.5kb upstream 0.5kb upstream 4197 true Chr06: 13377843-13382039 Phaseolus vulgaris
Phvul.006G042000 0.5kb upstream 0.5kb upstream 500 false Chr06: 13381540-13382039 Phaseolus vulgaris
Phvul.006G042000 0.5kb downstream 0.5kb downstream 4197 true Chr06: 13377343-13381539 Phaseolus vulgaris
Phvul.006G042000 0.5kb downstream 0.5kb downstream 500 false Chr06: 13377343-13377842 Phaseolus vulgaris
Phvul.006G042000 1.0kb upstream 1.0kb upstream 4697 true Chr06: 13377843-13382539 Phaseolus vulgaris
Phvul.006G042000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13381540-13382539 Phaseolus vulgaris
Phvul.006G042000 1.0kb downstream 1.0kb downstream 4697 true Chr06: 13376843-13381539 Phaseolus vulgaris
Phvul.006G042000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13376843-13377842 Phaseolus vulgaris
Phvul.006G042000 2.0kb upstream 2.0kb upstream 5697 true Chr06: 13377843-13383539 Phaseolus vulgaris
Phvul.006G042000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13381540-13383539 Phaseolus vulgaris
Phvul.006G042000 2.0kb downstream 2.0kb downstream 5697 true Chr06: 13375843-13381539 Phaseolus vulgaris
Phvul.006G042000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13375843-13377842 Phaseolus vulgaris
Phvul.006G042000 5.0kb upstream 5.0kb upstream 8697 true Chr06: 13377843-13386539 Phaseolus vulgaris
Phvul.006G042000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13381540-13386539 Phaseolus vulgaris
Phvul.006G042000 5.0kb downstream 5.0kb downstream 8697 true Chr06: 13372843-13381539 Phaseolus vulgaris
Phvul.006G042000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13372843-13377842 Phaseolus vulgaris
Phvul.006G042000 10.0kb upstream 10.0kb upstream 13697 true Chr06: 13377843-13391539 Phaseolus vulgaris
Phvul.006G042000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13381540-13391539 Phaseolus vulgaris
Phvul.006G042000 10.0kb downstream 10.0kb downstream 13697 true Chr06: 13367843-13381539 Phaseolus vulgaris
Phvul.006G042000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13367843-13377842 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122314211 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.349951 0.0 1.63054 Low High
cufflinks 0.0132 0.0 0.0700651 Low Low
cufflinks 0.153702 0.0 0.616816 Low  
cufflinks 0.165694 0.0 0.655962 Low High
cufflinks 0.0685153 0.0 0.304628 Low  
cufflinks 0.0360458 0.0 0.162048 Low  
cufflinks 0.0219174 0.0 0.113275 Low  
cufflinks 0.0157913 0.0 0.0925354 Low Low
cufflinks 0.0711004 0.0 0.309042 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0204748 0.0 0.103516 Low  

0 Strain