Gene : Phvul.006G041300 P. vulgaris v2.1
Defline:  (1 of 3) PF04578 - Protein of unknown function, DUF594 (DUF594) Genomic Order:  320
Name:  ? Phvul.006G041300 Secondary Identifier:  ? PAC:37172388
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G041300 0.5kb upstream 0.5kb upstream 5003 true Chr06: 13560927-13565929 Phaseolus vulgaris
Phvul.006G041300 0.5kb upstream 0.5kb upstream 500 false Chr06: 13560927-13561426 Phaseolus vulgaris
Phvul.006G041300 0.5kb downstream 0.5kb downstream 5003 true Chr06: 13561427-13566429 Phaseolus vulgaris
Phvul.006G041300 0.5kb downstream 0.5kb downstream 500 false Chr06: 13565930-13566429 Phaseolus vulgaris
Phvul.006G041300 1.0kb upstream 1.0kb upstream 5503 true Chr06: 13560427-13565929 Phaseolus vulgaris
Phvul.006G041300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13560427-13561426 Phaseolus vulgaris
Phvul.006G041300 1.0kb downstream 1.0kb downstream 5503 true Chr06: 13561427-13566929 Phaseolus vulgaris
Phvul.006G041300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13565930-13566929 Phaseolus vulgaris
Phvul.006G041300 2.0kb upstream 2.0kb upstream 6503 true Chr06: 13559427-13565929 Phaseolus vulgaris
Phvul.006G041300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13559427-13561426 Phaseolus vulgaris
Phvul.006G041300 2.0kb downstream 2.0kb downstream 6503 true Chr06: 13561427-13567929 Phaseolus vulgaris
Phvul.006G041300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13565930-13567929 Phaseolus vulgaris
Phvul.006G041300 5.0kb upstream 5.0kb upstream 9503 true Chr06: 13556427-13565929 Phaseolus vulgaris
Phvul.006G041300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13556427-13561426 Phaseolus vulgaris
Phvul.006G041300 5.0kb downstream 5.0kb downstream 9503 true Chr06: 13561427-13570929 Phaseolus vulgaris
Phvul.006G041300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13565930-13570929 Phaseolus vulgaris
Phvul.006G041300 10.0kb upstream 10.0kb upstream 14503 true Chr06: 13551427-13565929 Phaseolus vulgaris
Phvul.006G041300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13551427-13561426 Phaseolus vulgaris
Phvul.006G041300 10.0kb downstream 10.0kb downstream 14503 true Chr06: 13561427-13575929 Phaseolus vulgaris
Phvul.006G041300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13565930-13575929 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122314211 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0214451 0.0 0.0987095 Low Low
cufflinks 0.18454 0.0 0.705614 Low  
cufflinks 1.54192 0.0 4.74486    
cufflinks 0.0440996 0.0 0.191236 Low Low
cufflinks 0.69569 0.0 2.37162    
cufflinks 2.70525 0.0 7.80912   High
cufflinks 1.0078 0.0 3.24713    
cufflinks 0.319111 0.0 1.15746 Low  
cufflinks 1.59648 0.0 4.89147    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.975866 0.0 3.19052    

0 Strain