Gene : Phvul.010G098500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11514:SF38 - TRANSCRIPTION FACTOR MYC1 Genomic Order:  992
Name:  ? Phvul.010G098500 Secondary Identifier:  ? PAC:37143852
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G098500 0.5kb upstream 0.5kb upstream 5397 true Chr10: 36397527-36402923 Phaseolus vulgaris
Phvul.010G098500 0.5kb upstream 0.5kb upstream 500 false Chr10: 36402424-36402923 Phaseolus vulgaris
Phvul.010G098500 0.5kb downstream 0.5kb downstream 5397 true Chr10: 36397027-36402423 Phaseolus vulgaris
Phvul.010G098500 0.5kb downstream 0.5kb downstream 500 false Chr10: 36397027-36397526 Phaseolus vulgaris
Phvul.010G098500 1.0kb upstream 1.0kb upstream 5897 true Chr10: 36397527-36403423 Phaseolus vulgaris
Phvul.010G098500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36402424-36403423 Phaseolus vulgaris
Phvul.010G098500 1.0kb downstream 1.0kb downstream 5897 true Chr10: 36396527-36402423 Phaseolus vulgaris
Phvul.010G098500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36396527-36397526 Phaseolus vulgaris
Phvul.010G098500 2.0kb upstream 2.0kb upstream 6897 true Chr10: 36397527-36404423 Phaseolus vulgaris
Phvul.010G098500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36402424-36404423 Phaseolus vulgaris
Phvul.010G098500 2.0kb downstream 2.0kb downstream 6897 true Chr10: 36395527-36402423 Phaseolus vulgaris
Phvul.010G098500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36395527-36397526 Phaseolus vulgaris
Phvul.010G098500 5.0kb upstream 5.0kb upstream 9897 true Chr10: 36397527-36407423 Phaseolus vulgaris
Phvul.010G098500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36402424-36407423 Phaseolus vulgaris
Phvul.010G098500 5.0kb downstream 5.0kb downstream 9897 true Chr10: 36392527-36402423 Phaseolus vulgaris
Phvul.010G098500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36392527-36397526 Phaseolus vulgaris
Phvul.010G098500 10.0kb upstream 10.0kb upstream 14897 true Chr10: 36397527-36412423 Phaseolus vulgaris
Phvul.010G098500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36402424-36412423 Phaseolus vulgaris
Phvul.010G098500 10.0kb downstream 10.0kb downstream 14897 true Chr10: 36387527-36402423 Phaseolus vulgaris
Phvul.010G098500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36387527-36397526 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308831 5265 Fabidae View MSA
124074803 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.50731 0.0 27.2659    
cufflinks 24.5238 0.0 114.946   High
cufflinks 1.67258 0.0 7.2084    
cufflinks 4.61765 0.0 26.3592    
cufflinks 5.19704 0.0 23.2409    
cufflinks 10.8917 0.0 48.6312    
cufflinks 1.94643 0.0 8.19316    
cufflinks 0.633872 0.0 4.49546   Low
cufflinks 0.698382 0.0 4.70265   Low
cufflinks 3.91426 0.0 19.0862    
cufflinks 10.6385 0.0 52.1078    

0 Strain