Gene : Phvul.006G043900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10388//PTHR10388:SF16 - EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 // SUBFAMILY NOT NAMED Genomic Order:  392
Name:  ? Phvul.006G043900 Secondary Identifier:  ? PAC:37172418
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G043900 0.5kb upstream 0.5kb upstream 2033 true Chr06: 14740789-14742821 Phaseolus vulgaris
Phvul.006G043900 0.5kb upstream 0.5kb upstream 500 false Chr06: 14742322-14742821 Phaseolus vulgaris
Phvul.006G043900 0.5kb downstream 0.5kb downstream 2033 true Chr06: 14740289-14742321 Phaseolus vulgaris
Phvul.006G043900 0.5kb downstream 0.5kb downstream 500 false Chr06: 14740289-14740788 Phaseolus vulgaris
Phvul.006G043900 1.0kb upstream 1.0kb upstream 2533 true Chr06: 14740789-14743321 Phaseolus vulgaris
Phvul.006G043900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14742322-14743321 Phaseolus vulgaris
Phvul.006G043900 1.0kb downstream 1.0kb downstream 2533 true Chr06: 14739789-14742321 Phaseolus vulgaris
Phvul.006G043900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14739789-14740788 Phaseolus vulgaris
Phvul.006G043900 2.0kb upstream 2.0kb upstream 3533 true Chr06: 14740789-14744321 Phaseolus vulgaris
Phvul.006G043900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14742322-14744321 Phaseolus vulgaris
Phvul.006G043900 2.0kb downstream 2.0kb downstream 3533 true Chr06: 14738789-14742321 Phaseolus vulgaris
Phvul.006G043900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14738789-14740788 Phaseolus vulgaris
Phvul.006G043900 5.0kb upstream 5.0kb upstream 6533 true Chr06: 14740789-14747321 Phaseolus vulgaris
Phvul.006G043900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14742322-14747321 Phaseolus vulgaris
Phvul.006G043900 5.0kb downstream 5.0kb downstream 6533 true Chr06: 14735789-14742321 Phaseolus vulgaris
Phvul.006G043900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14735789-14740788 Phaseolus vulgaris
Phvul.006G043900 10.0kb upstream 10.0kb upstream 11533 true Chr06: 14740789-14752321 Phaseolus vulgaris
Phvul.006G043900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14742322-14752321 Phaseolus vulgaris
Phvul.006G043900 10.0kb downstream 10.0kb downstream 11533 true Chr06: 14730789-14742321 Phaseolus vulgaris
Phvul.006G043900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14730789-14740788 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301119 5265 Fabidae View MSA
124064821 5270 Rosid View MSA
123751000 5271 Pentapetalae View MSA
122795527 5272 Eudicot View MSA
122049714 5273 Angiosperm View MSA
121346980 5274 Embryophyte View MSA
123426316 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.7426 0.0 196.777 High High
cufflinks 16.7287 0.0 46.0658    
cufflinks 5.47718 0.0 16.9525   Low
cufflinks 68.1448 0.0 176.456 High High
cufflinks 14.0139 0.0 39.0485    
cufflinks 2.29629 0.0 7.84604   Low
cufflinks 20.3451 0.0 54.8376    
cufflinks 21.5292 0.0 57.9362    
cufflinks 12.0904 0.0 34.1335    
cufflinks 30.6498 0.0 80.6318    
cufflinks 16.4482 0.0 45.2862    

0 Strain