Gene : Phvul.010G097300 P. vulgaris v2.1
Defline:  (1 of 1) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  980
Name:  ? Phvul.010G097300 Secondary Identifier:  ? PAC:37142838
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G097300 0.5kb upstream 0.5kb upstream 4158 true Chr10: 36256874-36261031 Phaseolus vulgaris
Phvul.010G097300 0.5kb upstream 0.5kb upstream 500 false Chr10: 36260532-36261031 Phaseolus vulgaris
Phvul.010G097300 0.5kb downstream 0.5kb downstream 4158 true Chr10: 36256374-36260531 Phaseolus vulgaris
Phvul.010G097300 0.5kb downstream 0.5kb downstream 500 false Chr10: 36256374-36256873 Phaseolus vulgaris
Phvul.010G097300 1.0kb upstream 1.0kb upstream 4658 true Chr10: 36256874-36261531 Phaseolus vulgaris
Phvul.010G097300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36260532-36261531 Phaseolus vulgaris
Phvul.010G097300 1.0kb downstream 1.0kb downstream 4658 true Chr10: 36255874-36260531 Phaseolus vulgaris
Phvul.010G097300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36255874-36256873 Phaseolus vulgaris
Phvul.010G097300 2.0kb upstream 2.0kb upstream 5658 true Chr10: 36256874-36262531 Phaseolus vulgaris
Phvul.010G097300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36260532-36262531 Phaseolus vulgaris
Phvul.010G097300 2.0kb downstream 2.0kb downstream 5658 true Chr10: 36254874-36260531 Phaseolus vulgaris
Phvul.010G097300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36254874-36256873 Phaseolus vulgaris
Phvul.010G097300 5.0kb upstream 5.0kb upstream 8658 true Chr10: 36256874-36265531 Phaseolus vulgaris
Phvul.010G097300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36260532-36265531 Phaseolus vulgaris
Phvul.010G097300 5.0kb downstream 5.0kb downstream 8658 true Chr10: 36251874-36260531 Phaseolus vulgaris
Phvul.010G097300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36251874-36256873 Phaseolus vulgaris
Phvul.010G097300 10.0kb upstream 10.0kb upstream 13658 true Chr10: 36256874-36270531 Phaseolus vulgaris
Phvul.010G097300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36260532-36270531 Phaseolus vulgaris
Phvul.010G097300 10.0kb downstream 10.0kb downstream 13658 true Chr10: 36246874-36260531 Phaseolus vulgaris
Phvul.010G097300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36246874-36256873 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300742 5265 Fabidae View MSA
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.36903 0.0 15.6573    
cufflinks 11.8792 0.0 32.2058    
cufflinks 12.8874 0.0 34.6738    
cufflinks 4.03586 0.0 11.993    
cufflinks 10.4694 0.0 28.4663    
cufflinks 13.7561 0.0 36.8495    
cufflinks 4.07862 0.0 12.2177    
cufflinks 3.29858 0.0 10.1859   Low
cufflinks 2.67458 0.0 8.44026   Low
cufflinks 9.33817 0.0 25.8138    
cufflinks 17.656 0.0 46.3749   High

0 Strain