Gene : Phvul.006G043100 P. vulgaris v2.1
Genomic Order:  384 Name:  ? Phvul.006G043100
Secondary Identifier:  ? PAC:37172869
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G043100 0.5kb upstream 0.5kb upstream 1121 true Chr06: 14638953-14640073 Phaseolus vulgaris
Phvul.006G043100 0.5kb upstream 0.5kb upstream 500 false Chr06: 14638953-14639452 Phaseolus vulgaris
Phvul.006G043100 0.5kb downstream 0.5kb downstream 1121 true Chr06: 14639453-14640573 Phaseolus vulgaris
Phvul.006G043100 0.5kb downstream 0.5kb downstream 500 false Chr06: 14640074-14640573 Phaseolus vulgaris
Phvul.006G043100 1.0kb upstream 1.0kb upstream 1621 true Chr06: 14638453-14640073 Phaseolus vulgaris
Phvul.006G043100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14638453-14639452 Phaseolus vulgaris
Phvul.006G043100 1.0kb downstream 1.0kb downstream 1621 true Chr06: 14639453-14641073 Phaseolus vulgaris
Phvul.006G043100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14640074-14641073 Phaseolus vulgaris
Phvul.006G043100 2.0kb upstream 2.0kb upstream 2621 true Chr06: 14637453-14640073 Phaseolus vulgaris
Phvul.006G043100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14637453-14639452 Phaseolus vulgaris
Phvul.006G043100 2.0kb downstream 2.0kb downstream 2621 true Chr06: 14639453-14642073 Phaseolus vulgaris
Phvul.006G043100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14640074-14642073 Phaseolus vulgaris
Phvul.006G043100 5.0kb upstream 5.0kb upstream 5621 true Chr06: 14634453-14640073 Phaseolus vulgaris
Phvul.006G043100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14634453-14639452 Phaseolus vulgaris
Phvul.006G043100 5.0kb downstream 5.0kb downstream 5621 true Chr06: 14639453-14645073 Phaseolus vulgaris
Phvul.006G043100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14640074-14645073 Phaseolus vulgaris
Phvul.006G043100 10.0kb upstream 10.0kb upstream 10621 true Chr06: 14629453-14640073 Phaseolus vulgaris
Phvul.006G043100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14629453-14639452 Phaseolus vulgaris
Phvul.006G043100 10.0kb downstream 10.0kb downstream 10621 true Chr06: 14639453-14650073 Phaseolus vulgaris
Phvul.006G043100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14640074-14650073 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313292 5265 Fabidae View MSA
124068820 5270 Rosid View MSA
123742955 5271 Pentapetalae View MSA
122795546 5272 Eudicot View MSA
122045130 5273 Angiosperm View MSA
121310402 5274 Embryophyte View MSA
123347893 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.82798 0.0 6.67828    
cufflinks 0.477546 0.0 1.94575 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.88216 0.0 6.87041    
cufflinks 0.55665 0.0 2.25006 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.904 0.0 13.167   High
cufflinks 1.67482 0.0 6.16801    
cufflinks 2.24762 0.0 8.04992    
cufflinks 0.106037 0.0 0.50097 Low Low
cufflinks 0.981214 0.0 3.78806    

0 Strain