Gene : Phvul.006G046400 P. vulgaris v2.1
Defline:  (1 of 1) K01663 - glutamine amidotransferase / cyclase (HIS7) Genomic Order:  417
Name:  ? Phvul.006G046400 Secondary Identifier:  ? PAC:37174194
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G046400 0.5kb upstream 0.5kb upstream 8421 true Chr06: 15006209-15014629 Phaseolus vulgaris
Phvul.006G046400 0.5kb upstream 0.5kb upstream 500 false Chr06: 15014130-15014629 Phaseolus vulgaris
Phvul.006G046400 0.5kb downstream 0.5kb downstream 8421 true Chr06: 15005709-15014129 Phaseolus vulgaris
Phvul.006G046400 0.5kb downstream 0.5kb downstream 500 false Chr06: 15005709-15006208 Phaseolus vulgaris
Phvul.006G046400 1.0kb upstream 1.0kb upstream 8921 true Chr06: 15006209-15015129 Phaseolus vulgaris
Phvul.006G046400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15014130-15015129 Phaseolus vulgaris
Phvul.006G046400 1.0kb downstream 1.0kb downstream 8921 true Chr06: 15005209-15014129 Phaseolus vulgaris
Phvul.006G046400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15005209-15006208 Phaseolus vulgaris
Phvul.006G046400 2.0kb upstream 2.0kb upstream 9921 true Chr06: 15006209-15016129 Phaseolus vulgaris
Phvul.006G046400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15014130-15016129 Phaseolus vulgaris
Phvul.006G046400 2.0kb downstream 2.0kb downstream 9921 true Chr06: 15004209-15014129 Phaseolus vulgaris
Phvul.006G046400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15004209-15006208 Phaseolus vulgaris
Phvul.006G046400 5.0kb upstream 5.0kb upstream 12921 true Chr06: 15006209-15019129 Phaseolus vulgaris
Phvul.006G046400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15014130-15019129 Phaseolus vulgaris
Phvul.006G046400 5.0kb downstream 5.0kb downstream 12921 true Chr06: 15001209-15014129 Phaseolus vulgaris
Phvul.006G046400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15001209-15006208 Phaseolus vulgaris
Phvul.006G046400 10.0kb upstream 10.0kb upstream 17921 true Chr06: 15006209-15024129 Phaseolus vulgaris
Phvul.006G046400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15014130-15024129 Phaseolus vulgaris
Phvul.006G046400 10.0kb downstream 10.0kb downstream 17921 true Chr06: 14996209-15014129 Phaseolus vulgaris
Phvul.006G046400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14996209-15006208 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306975 5265 Fabidae View MSA
124066754 5270 Rosid View MSA
123743623 5271 Pentapetalae View MSA
122792259 5272 Eudicot View MSA
122046043 5273 Angiosperm View MSA
121347063 5274 Embryophyte View MSA
123424776 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.69877 0.0 20.7407    
cufflinks 11.3424 0.0 29.8251   High
cufflinks 9.34072 0.0 24.8064    
cufflinks 7.86358 0.0 21.3782    
cufflinks 7.86245 0.0 21.3046    
cufflinks 7.13637 0.0 19.3928    
cufflinks 6.84011 0.0 18.6695   Low
cufflinks 12.3967 0.0 32.366   High
cufflinks 7.85994 0.0 21.2681    
cufflinks 12.747 0.0 33.3364   High
cufflinks 6.88603 0.0 18.8693    

0 Strain