Gene : Phvul.006G047200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33227:SF5 - STIG1 LIKE PROTEIN-RELATED Genomic Order:  425
Name:  ? Phvul.006G047200 Secondary Identifier:  ? PAC:37172653
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G047200 0.5kb upstream 0.5kb upstream 977 true Chr06: 15084776-15085752 Phaseolus vulgaris
Phvul.006G047200 0.5kb upstream 0.5kb upstream 500 false Chr06: 15085253-15085752 Phaseolus vulgaris
Phvul.006G047200 0.5kb downstream 0.5kb downstream 977 true Chr06: 15084276-15085252 Phaseolus vulgaris
Phvul.006G047200 0.5kb downstream 0.5kb downstream 500 false Chr06: 15084276-15084775 Phaseolus vulgaris
Phvul.006G047200 1.0kb upstream 1.0kb upstream 1477 true Chr06: 15084776-15086252 Phaseolus vulgaris
Phvul.006G047200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15085253-15086252 Phaseolus vulgaris
Phvul.006G047200 1.0kb downstream 1.0kb downstream 1477 true Chr06: 15083776-15085252 Phaseolus vulgaris
Phvul.006G047200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15083776-15084775 Phaseolus vulgaris
Phvul.006G047200 2.0kb upstream 2.0kb upstream 2477 true Chr06: 15084776-15087252 Phaseolus vulgaris
Phvul.006G047200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15085253-15087252 Phaseolus vulgaris
Phvul.006G047200 2.0kb downstream 2.0kb downstream 2477 true Chr06: 15082776-15085252 Phaseolus vulgaris
Phvul.006G047200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15082776-15084775 Phaseolus vulgaris
Phvul.006G047200 5.0kb upstream 5.0kb upstream 5477 true Chr06: 15084776-15090252 Phaseolus vulgaris
Phvul.006G047200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15085253-15090252 Phaseolus vulgaris
Phvul.006G047200 5.0kb downstream 5.0kb downstream 5477 true Chr06: 15079776-15085252 Phaseolus vulgaris
Phvul.006G047200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15079776-15084775 Phaseolus vulgaris
Phvul.006G047200 10.0kb upstream 10.0kb upstream 10477 true Chr06: 15084776-15095252 Phaseolus vulgaris
Phvul.006G047200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15085253-15095252 Phaseolus vulgaris
Phvul.006G047200 10.0kb downstream 10.0kb downstream 10477 true Chr06: 15074776-15085252 Phaseolus vulgaris
Phvul.006G047200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15074776-15084775 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304346 5265 Fabidae View MSA
124071868 5270 Rosid View MSA
123753297 5271 Pentapetalae View MSA
122793251 5272 Eudicot View MSA
122045187 5273 Angiosperm View MSA
121350525 5274 Embryophyte View MSA
123381772 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.55689 0.0 6.10186    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.19135 0.0 24.4625    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain