Gene : Phvul.006G045300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10641:SF475 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  406
Name:  ? Phvul.006G045300 Secondary Identifier:  ? PAC:37171418
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G045300 0.5kb upstream 0.5kb upstream 2790 true Chr06: 14896486-14899275 Phaseolus vulgaris
Phvul.006G045300 0.5kb upstream 0.5kb upstream 500 false Chr06: 14898776-14899275 Phaseolus vulgaris
Phvul.006G045300 0.5kb downstream 0.5kb downstream 2790 true Chr06: 14895986-14898775 Phaseolus vulgaris
Phvul.006G045300 0.5kb downstream 0.5kb downstream 500 false Chr06: 14895986-14896485 Phaseolus vulgaris
Phvul.006G045300 1.0kb upstream 1.0kb upstream 3290 true Chr06: 14896486-14899775 Phaseolus vulgaris
Phvul.006G045300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14898776-14899775 Phaseolus vulgaris
Phvul.006G045300 1.0kb downstream 1.0kb downstream 3290 true Chr06: 14895486-14898775 Phaseolus vulgaris
Phvul.006G045300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14895486-14896485 Phaseolus vulgaris
Phvul.006G045300 2.0kb upstream 2.0kb upstream 4290 true Chr06: 14896486-14900775 Phaseolus vulgaris
Phvul.006G045300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14898776-14900775 Phaseolus vulgaris
Phvul.006G045300 2.0kb downstream 2.0kb downstream 4290 true Chr06: 14894486-14898775 Phaseolus vulgaris
Phvul.006G045300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14894486-14896485 Phaseolus vulgaris
Phvul.006G045300 5.0kb upstream 5.0kb upstream 7290 true Chr06: 14896486-14903775 Phaseolus vulgaris
Phvul.006G045300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14898776-14903775 Phaseolus vulgaris
Phvul.006G045300 5.0kb downstream 5.0kb downstream 7290 true Chr06: 14891486-14898775 Phaseolus vulgaris
Phvul.006G045300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14891486-14896485 Phaseolus vulgaris
Phvul.006G045300 10.0kb upstream 10.0kb upstream 12290 true Chr06: 14896486-14908775 Phaseolus vulgaris
Phvul.006G045300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14898776-14908775 Phaseolus vulgaris
Phvul.006G045300 10.0kb downstream 10.0kb downstream 12290 true Chr06: 14886486-14898775 Phaseolus vulgaris
Phvul.006G045300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14886486-14896485 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308514 5265 Fabidae View MSA
124070480 5270 Rosid View MSA
123751409 5271 Pentapetalae View MSA
122786305 5272 Eudicot View MSA
122048275 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.258139 0.0 1.02776 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0452618 0.0 0.210248 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0258435 0.0 0.128211 Low  

0 Strain