Gene : Phvul.010G099600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11165//PTHR11165:SF61 - SKP1 // SUBFAMILY NOT NAMED Genomic Order:  1002
Name:  ? Phvul.010G099600 Secondary Identifier:  ? PAC:37142220
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G099600 0.5kb upstream 0.5kb upstream 13643 true Chr10: 36643442-36657084 Phaseolus vulgaris
Phvul.010G099600 0.5kb upstream 0.5kb upstream 500 false Chr10: 36656585-36657084 Phaseolus vulgaris
Phvul.010G099600 0.5kb downstream 0.5kb downstream 13643 true Chr10: 36642942-36656584 Phaseolus vulgaris
Phvul.010G099600 0.5kb downstream 0.5kb downstream 500 false Chr10: 36642942-36643441 Phaseolus vulgaris
Phvul.010G099600 1.0kb upstream 1.0kb upstream 14143 true Chr10: 36643442-36657584 Phaseolus vulgaris
Phvul.010G099600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36656585-36657584 Phaseolus vulgaris
Phvul.010G099600 1.0kb downstream 1.0kb downstream 14143 true Chr10: 36642442-36656584 Phaseolus vulgaris
Phvul.010G099600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36642442-36643441 Phaseolus vulgaris
Phvul.010G099600 2.0kb upstream 2.0kb upstream 15143 true Chr10: 36643442-36658584 Phaseolus vulgaris
Phvul.010G099600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36656585-36658584 Phaseolus vulgaris
Phvul.010G099600 2.0kb downstream 2.0kb downstream 15143 true Chr10: 36641442-36656584 Phaseolus vulgaris
Phvul.010G099600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36641442-36643441 Phaseolus vulgaris
Phvul.010G099600 5.0kb upstream 5.0kb upstream 18143 true Chr10: 36643442-36661584 Phaseolus vulgaris
Phvul.010G099600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36656585-36661584 Phaseolus vulgaris
Phvul.010G099600 5.0kb downstream 5.0kb downstream 18143 true Chr10: 36638442-36656584 Phaseolus vulgaris
Phvul.010G099600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36638442-36643441 Phaseolus vulgaris
Phvul.010G099600 10.0kb upstream 10.0kb upstream 23143 true Chr10: 36643442-36666584 Phaseolus vulgaris
Phvul.010G099600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36656585-36666584 Phaseolus vulgaris
Phvul.010G099600 10.0kb downstream 10.0kb downstream 23143 true Chr10: 36633442-36656584 Phaseolus vulgaris
Phvul.010G099600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36633442-36643441 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94201 0.0 6.19138    
cufflinks 2.43585 0.0 7.58912    
cufflinks 3.39362 0.0 10.1134   High
cufflinks 0.982584 0.0 3.4216   Low
cufflinks 2.11939 0.0 6.78189    
cufflinks 3.55593 0.0 10.5789   High
cufflinks 2.95872 0.0 9.00111    
cufflinks 2.77294 0.0 8.45073    
cufflinks 1.98103 0.0 6.32065    
cufflinks 2.71107 0.0 8.36203    
cufflinks 2.13317 0.0 6.80048    

0 Strain