Gene : Phvul.006G046300 P. vulgaris v2.1
Genomic Order:  416 Name:  ? Phvul.006G046300
Secondary Identifier:  ? PAC:37173924
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G046300 0.5kb upstream 0.5kb upstream 1422 true Chr06: 14997620-14999041 Phaseolus vulgaris
Phvul.006G046300 0.5kb upstream 0.5kb upstream 500 false Chr06: 14997620-14998119 Phaseolus vulgaris
Phvul.006G046300 0.5kb downstream 0.5kb downstream 1422 true Chr06: 14998120-14999541 Phaseolus vulgaris
Phvul.006G046300 0.5kb downstream 0.5kb downstream 500 false Chr06: 14999042-14999541 Phaseolus vulgaris
Phvul.006G046300 1.0kb upstream 1.0kb upstream 1922 true Chr06: 14997120-14999041 Phaseolus vulgaris
Phvul.006G046300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14997120-14998119 Phaseolus vulgaris
Phvul.006G046300 1.0kb downstream 1.0kb downstream 1922 true Chr06: 14998120-15000041 Phaseolus vulgaris
Phvul.006G046300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14999042-15000041 Phaseolus vulgaris
Phvul.006G046300 2.0kb upstream 2.0kb upstream 2922 true Chr06: 14996120-14999041 Phaseolus vulgaris
Phvul.006G046300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14996120-14998119 Phaseolus vulgaris
Phvul.006G046300 2.0kb downstream 2.0kb downstream 2922 true Chr06: 14998120-15001041 Phaseolus vulgaris
Phvul.006G046300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14999042-15001041 Phaseolus vulgaris
Phvul.006G046300 5.0kb upstream 5.0kb upstream 5922 true Chr06: 14993120-14999041 Phaseolus vulgaris
Phvul.006G046300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14993120-14998119 Phaseolus vulgaris
Phvul.006G046300 5.0kb downstream 5.0kb downstream 5922 true Chr06: 14998120-15004041 Phaseolus vulgaris
Phvul.006G046300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14999042-15004041 Phaseolus vulgaris
Phvul.006G046300 10.0kb upstream 10.0kb upstream 10922 true Chr06: 14988120-14999041 Phaseolus vulgaris
Phvul.006G046300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14988120-14998119 Phaseolus vulgaris
Phvul.006G046300 10.0kb downstream 10.0kb downstream 10922 true Chr06: 14998120-15009041 Phaseolus vulgaris
Phvul.006G046300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14999042-15009041 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792378 5273 Angiosperm View MSA
122302971 5265 Fabidae View MSA
124073568 5270 Rosid View MSA
123745925 5271 Pentapetalae View MSA
122797587 5272 Eudicot View MSA
121063613 5274 Embryophyte View MSA
123103351 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.2003 0.0 176.021 High  
cufflinks 234.759 0.0 717.766 High  
cufflinks 539.349 0.0 1902.47 High  
cufflinks 816.243 0.0 3123.87 High  
cufflinks 564.434 0.0 2086.94 High  
cufflinks 171.323 0.0 499.379 High  
cufflinks 0.285341 0.0 1.11079 Low Low
cufflinks 0.0374973 0.0 0.176019 Low Low
cufflinks 0.334348 0.0 1.29391 Low Low
cufflinks 1.19279 0.0 4.10164    
cufflinks 346.753 0.0 1158.99 High  

0 Strain