Gene : Phvul.006G030000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22870:SF219 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN-RELATED Genomic Order:  251
Name:  ? Phvul.006G030000 Secondary Identifier:  ? PAC:37174059
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G030000 0.5kb upstream 0.5kb upstream 14163 true Chr06: 11502521-11516683 Phaseolus vulgaris
Phvul.006G030000 0.5kb upstream 0.5kb upstream 500 false Chr06: 11516184-11516683 Phaseolus vulgaris
Phvul.006G030000 0.5kb downstream 0.5kb downstream 14163 true Chr06: 11502021-11516183 Phaseolus vulgaris
Phvul.006G030000 0.5kb downstream 0.5kb downstream 500 false Chr06: 11502021-11502520 Phaseolus vulgaris
Phvul.006G030000 1.0kb upstream 1.0kb upstream 14663 true Chr06: 11502521-11517183 Phaseolus vulgaris
Phvul.006G030000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11516184-11517183 Phaseolus vulgaris
Phvul.006G030000 1.0kb downstream 1.0kb downstream 14663 true Chr06: 11501521-11516183 Phaseolus vulgaris
Phvul.006G030000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11501521-11502520 Phaseolus vulgaris
Phvul.006G030000 2.0kb upstream 2.0kb upstream 15663 true Chr06: 11502521-11518183 Phaseolus vulgaris
Phvul.006G030000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11516184-11518183 Phaseolus vulgaris
Phvul.006G030000 2.0kb downstream 2.0kb downstream 15663 true Chr06: 11500521-11516183 Phaseolus vulgaris
Phvul.006G030000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11500521-11502520 Phaseolus vulgaris
Phvul.006G030000 5.0kb upstream 5.0kb upstream 18663 true Chr06: 11502521-11521183 Phaseolus vulgaris
Phvul.006G030000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11516184-11521183 Phaseolus vulgaris
Phvul.006G030000 5.0kb downstream 5.0kb downstream 18663 true Chr06: 11497521-11516183 Phaseolus vulgaris
Phvul.006G030000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11497521-11502520 Phaseolus vulgaris
Phvul.006G030000 10.0kb upstream 10.0kb upstream 23663 true Chr06: 11502521-11526183 Phaseolus vulgaris
Phvul.006G030000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11516184-11526183 Phaseolus vulgaris
Phvul.006G030000 10.0kb downstream 10.0kb downstream 23663 true Chr06: 11492521-11516183 Phaseolus vulgaris
Phvul.006G030000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11492521-11502520 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254686 5265 Fabidae View MSA
123996736 5270 Rosid View MSA
123743329 5271 Pentapetalae View MSA
122789808 5272 Eudicot View MSA
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.60924 0.0 5.64342   Low
cufflinks 5.09579 0.0 17.0091    
cufflinks 4.14889 0.0 14.2688    
cufflinks 3.05153 0.0 11.2571   Low
cufflinks 6.66772 0.0 21.7023    
cufflinks 6.87169 0.0 22.2029    
cufflinks 7.62213 0.0 24.3566    
cufflinks 5.18848 0.0 17.162    
cufflinks 6.74606 0.0 21.9472    
cufflinks 6.48662 0.0 21.1297    
cufflinks 7.09017 0.0 23.0728    

0 Strain