Gene : Phvul.006G032100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  274
Name:  ? Phvul.006G032100 Secondary Identifier:  ? PAC:37172364
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6773 Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G032100 0.5kb upstream 0.5kb upstream 35015 true Chr06: 12326023-12361037 Phaseolus vulgaris
Phvul.006G032100 0.5kb upstream 0.5kb upstream 500 false Chr06: 12326023-12326522 Phaseolus vulgaris
Phvul.006G032100 0.5kb downstream 0.5kb downstream 35015 true Chr06: 12326523-12361537 Phaseolus vulgaris
Phvul.006G032100 0.5kb downstream 0.5kb downstream 500 false Chr06: 12361038-12361537 Phaseolus vulgaris
Phvul.006G032100 1.0kb upstream 1.0kb upstream 35515 true Chr06: 12325523-12361037 Phaseolus vulgaris
Phvul.006G032100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12325523-12326522 Phaseolus vulgaris
Phvul.006G032100 1.0kb downstream 1.0kb downstream 35515 true Chr06: 12326523-12362037 Phaseolus vulgaris
Phvul.006G032100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12361038-12362037 Phaseolus vulgaris
Phvul.006G032100 2.0kb upstream 2.0kb upstream 36515 true Chr06: 12324523-12361037 Phaseolus vulgaris
Phvul.006G032100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12324523-12326522 Phaseolus vulgaris
Phvul.006G032100 2.0kb downstream 2.0kb downstream 36515 true Chr06: 12326523-12363037 Phaseolus vulgaris
Phvul.006G032100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12361038-12363037 Phaseolus vulgaris
Phvul.006G032100 5.0kb upstream 5.0kb upstream 39515 true Chr06: 12321523-12361037 Phaseolus vulgaris
Phvul.006G032100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12321523-12326522 Phaseolus vulgaris
Phvul.006G032100 5.0kb downstream 5.0kb downstream 39515 true Chr06: 12326523-12366037 Phaseolus vulgaris
Phvul.006G032100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12361038-12366037 Phaseolus vulgaris
Phvul.006G032100 10.0kb upstream 10.0kb upstream 44515 true Chr06: 12316523-12361037 Phaseolus vulgaris
Phvul.006G032100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12316523-12326522 Phaseolus vulgaris
Phvul.006G032100 10.0kb downstream 10.0kb downstream 44515 true Chr06: 12326523-12371037 Phaseolus vulgaris
Phvul.006G032100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12361038-12371037 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305452 5265 Fabidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.411305 0.0 1.35151 Low Low
cufflinks 3.02229 0.0 8.08488    
cufflinks 3.4936 0.0 9.22627    
cufflinks 1.02967 0.0 3.08574   Low
cufflinks 3.61125 0.0 9.6015    
cufflinks 4.45978 0.0 11.6409    
cufflinks 7.61966 0.0 19.6979   High
cufflinks 3.73641 0.0 9.81574    
cufflinks 8.34199 0.0 21.5752   High
cufflinks 1.70432 0.0 4.79545    
cufflinks 2.3635 0.0 6.4885    

0 Strain