Gene : Phvul.010G086700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12271:SF58 - EXPRESSED PROTEIN Genomic Order:  863
Name:  ? Phvul.010G086700 Secondary Identifier:  ? PAC:37142475
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G086700 0.5kb upstream 0.5kb upstream 6041 true Chr10: 33257328-33263368 Phaseolus vulgaris
Phvul.010G086700 0.5kb upstream 0.5kb upstream 500 false Chr10: 33257328-33257827 Phaseolus vulgaris
Phvul.010G086700 0.5kb downstream 0.5kb downstream 6041 true Chr10: 33257828-33263868 Phaseolus vulgaris
Phvul.010G086700 0.5kb downstream 0.5kb downstream 500 false Chr10: 33263369-33263868 Phaseolus vulgaris
Phvul.010G086700 1.0kb upstream 1.0kb upstream 6541 true Chr10: 33256828-33263368 Phaseolus vulgaris
Phvul.010G086700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 33256828-33257827 Phaseolus vulgaris
Phvul.010G086700 1.0kb downstream 1.0kb downstream 6541 true Chr10: 33257828-33264368 Phaseolus vulgaris
Phvul.010G086700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 33263369-33264368 Phaseolus vulgaris
Phvul.010G086700 2.0kb upstream 2.0kb upstream 7541 true Chr10: 33255828-33263368 Phaseolus vulgaris
Phvul.010G086700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 33255828-33257827 Phaseolus vulgaris
Phvul.010G086700 2.0kb downstream 2.0kb downstream 7541 true Chr10: 33257828-33265368 Phaseolus vulgaris
Phvul.010G086700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 33263369-33265368 Phaseolus vulgaris
Phvul.010G086700 5.0kb upstream 5.0kb upstream 10541 true Chr10: 33252828-33263368 Phaseolus vulgaris
Phvul.010G086700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 33252828-33257827 Phaseolus vulgaris
Phvul.010G086700 5.0kb downstream 5.0kb downstream 10541 true Chr10: 33257828-33268368 Phaseolus vulgaris
Phvul.010G086700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 33263369-33268368 Phaseolus vulgaris
Phvul.010G086700 10.0kb upstream 10.0kb upstream 15541 true Chr10: 33247828-33263368 Phaseolus vulgaris
Phvul.010G086700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 33247828-33257827 Phaseolus vulgaris
Phvul.010G086700 10.0kb downstream 10.0kb downstream 15541 true Chr10: 33257828-33273368 Phaseolus vulgaris
Phvul.010G086700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 33263369-33273368 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308232 5265 Fabidae View MSA
124067055 5270 Rosid View MSA
123752955 5271 Pentapetalae View MSA
122796167 5272 Eudicot View MSA
122048124 5273 Angiosperm View MSA
121349323 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9459 0.0 46.4302    
cufflinks 27.0059 0.0 70.7204    
cufflinks 17.0817 0.0 44.1598    
cufflinks 17.0295 0.0 44.0189    
cufflinks 25.2802 0.0 65.982    
cufflinks 17.9489 0.0 46.4261    
cufflinks 18.5295 0.0 47.9757    
cufflinks 15.837 0.0 40.9367   Low
cufflinks 19.8432 0.0 51.4173    
cufflinks 38.3841 0.0 102.878 High High
cufflinks 24.7697 0.0 64.6167    

0 Strain