Gene : Phvul.010G085100 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  753
Name:  ? Phvul.010G085100 Secondary Identifier:  ? PAC:37142166
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G085100 0.5kb upstream 0.5kb upstream 1707 true Chr10: 24022391-24024097 Phaseolus vulgaris
Phvul.010G085100 0.5kb upstream 0.5kb upstream 500 false Chr10: 24023598-24024097 Phaseolus vulgaris
Phvul.010G085100 0.5kb downstream 0.5kb downstream 1707 true Chr10: 24021891-24023597 Phaseolus vulgaris
Phvul.010G085100 0.5kb downstream 0.5kb downstream 500 false Chr10: 24021891-24022390 Phaseolus vulgaris
Phvul.010G085100 1.0kb upstream 1.0kb upstream 2207 true Chr10: 24022391-24024597 Phaseolus vulgaris
Phvul.010G085100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 24023598-24024597 Phaseolus vulgaris
Phvul.010G085100 1.0kb downstream 1.0kb downstream 2207 true Chr10: 24021391-24023597 Phaseolus vulgaris
Phvul.010G085100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 24021391-24022390 Phaseolus vulgaris
Phvul.010G085100 2.0kb upstream 2.0kb upstream 3207 true Chr10: 24022391-24025597 Phaseolus vulgaris
Phvul.010G085100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 24023598-24025597 Phaseolus vulgaris
Phvul.010G085100 2.0kb downstream 2.0kb downstream 3207 true Chr10: 24020391-24023597 Phaseolus vulgaris
Phvul.010G085100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 24020391-24022390 Phaseolus vulgaris
Phvul.010G085100 5.0kb upstream 5.0kb upstream 6207 true Chr10: 24022391-24028597 Phaseolus vulgaris
Phvul.010G085100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 24023598-24028597 Phaseolus vulgaris
Phvul.010G085100 5.0kb downstream 5.0kb downstream 6207 true Chr10: 24017391-24023597 Phaseolus vulgaris
Phvul.010G085100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 24017391-24022390 Phaseolus vulgaris
Phvul.010G085100 10.0kb upstream 10.0kb upstream 11207 true Chr10: 24022391-24033597 Phaseolus vulgaris
Phvul.010G085100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 24023598-24033597 Phaseolus vulgaris
Phvul.010G085100 10.0kb downstream 10.0kb downstream 11207 true Chr10: 24012391-24023597 Phaseolus vulgaris
Phvul.010G085100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 24012391-24022390 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311197 5265 Fabidae View MSA
124070912 5270 Rosid View MSA
123743225 5271 Pentapetalae View MSA
122795677 5272 Eudicot View MSA
122049711 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.57484 0.0 19.4594   High
cufflinks 3.56974 0.0 11.3201    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.317924 0.0 1.27461 Low  
cufflinks 0.650384 0.0 2.47154    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.252707 0.0 1.02608 Low  
cufflinks 0.105703 0.0 0.462838 Low  
cufflinks 0.386162 0.0 1.51577 Low  
cufflinks 7.27797 0.0 21.3392   High
cufflinks 0.0340707 0.0 0.169026 Low Low

0 Strain