Gene : Phvul.006G031700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED Genomic Order:  271
Name:  ? Phvul.006G031700 Secondary Identifier:  ? PAC:37172058
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7238 Phaseolus vulgaris pathologic  
Pvulgaris SUCSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G031700 0.5kb upstream 0.5kb upstream 7609 true Chr06: 12230650-12238258 Phaseolus vulgaris
Phvul.006G031700 0.5kb upstream 0.5kb upstream 500 false Chr06: 12230650-12231149 Phaseolus vulgaris
Phvul.006G031700 0.5kb downstream 0.5kb downstream 7609 true Chr06: 12231150-12238758 Phaseolus vulgaris
Phvul.006G031700 0.5kb downstream 0.5kb downstream 500 false Chr06: 12238259-12238758 Phaseolus vulgaris
Phvul.006G031700 1.0kb upstream 1.0kb upstream 8109 true Chr06: 12230150-12238258 Phaseolus vulgaris
Phvul.006G031700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12230150-12231149 Phaseolus vulgaris
Phvul.006G031700 1.0kb downstream 1.0kb downstream 8109 true Chr06: 12231150-12239258 Phaseolus vulgaris
Phvul.006G031700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12238259-12239258 Phaseolus vulgaris
Phvul.006G031700 2.0kb upstream 2.0kb upstream 9109 true Chr06: 12229150-12238258 Phaseolus vulgaris
Phvul.006G031700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12229150-12231149 Phaseolus vulgaris
Phvul.006G031700 2.0kb downstream 2.0kb downstream 9109 true Chr06: 12231150-12240258 Phaseolus vulgaris
Phvul.006G031700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12238259-12240258 Phaseolus vulgaris
Phvul.006G031700 5.0kb upstream 5.0kb upstream 12109 true Chr06: 12226150-12238258 Phaseolus vulgaris
Phvul.006G031700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12226150-12231149 Phaseolus vulgaris
Phvul.006G031700 5.0kb downstream 5.0kb downstream 12109 true Chr06: 12231150-12243258 Phaseolus vulgaris
Phvul.006G031700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12238259-12243258 Phaseolus vulgaris
Phvul.006G031700 10.0kb upstream 10.0kb upstream 17109 true Chr06: 12221150-12238258 Phaseolus vulgaris
Phvul.006G031700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12221150-12231149 Phaseolus vulgaris
Phvul.006G031700 10.0kb downstream 10.0kb downstream 17109 true Chr06: 12231150-12248258 Phaseolus vulgaris
Phvul.006G031700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12238259-12248258 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299377 5265 Fabidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.516442 0.0 1.70878    
cufflinks 0.987765 0.0 3.04317    
cufflinks 22.0771 0.0 59.0113   High
cufflinks 0.848066 0.0 2.68274    
cufflinks 0.743488 0.0 2.38352    
cufflinks 8.40658 0.0 21.7459   High
cufflinks 0.533857 0.0 1.75864 Low  
cufflinks 0.170775 0.0 0.630652 Low Low
cufflinks 0.626895 0.0 2.03121    
cufflinks 1.33546 0.0 3.97787    
cufflinks 0.275855 0.0 0.983826 Low  

0 Strain