Gene : Phvul.010G090300 P. vulgaris v2.1
Defline:  (1 of 50) K09338 - homeobox-leucine zipper protein (HD-ZIP) Genomic Order:  897
Name:  ? Phvul.010G090300 Secondary Identifier:  ? PAC:37143204
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G090300 0.5kb upstream 0.5kb upstream 7074 true Chr10: 34335854-34342927 Phaseolus vulgaris
Phvul.010G090300 0.5kb upstream 0.5kb upstream 500 false Chr10: 34342428-34342927 Phaseolus vulgaris
Phvul.010G090300 0.5kb downstream 0.5kb downstream 7074 true Chr10: 34335354-34342427 Phaseolus vulgaris
Phvul.010G090300 0.5kb downstream 0.5kb downstream 500 false Chr10: 34335354-34335853 Phaseolus vulgaris
Phvul.010G090300 1.0kb upstream 1.0kb upstream 7574 true Chr10: 34335854-34343427 Phaseolus vulgaris
Phvul.010G090300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34342428-34343427 Phaseolus vulgaris
Phvul.010G090300 1.0kb downstream 1.0kb downstream 7574 true Chr10: 34334854-34342427 Phaseolus vulgaris
Phvul.010G090300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34334854-34335853 Phaseolus vulgaris
Phvul.010G090300 2.0kb upstream 2.0kb upstream 8574 true Chr10: 34335854-34344427 Phaseolus vulgaris
Phvul.010G090300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34342428-34344427 Phaseolus vulgaris
Phvul.010G090300 2.0kb downstream 2.0kb downstream 8574 true Chr10: 34333854-34342427 Phaseolus vulgaris
Phvul.010G090300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34333854-34335853 Phaseolus vulgaris
Phvul.010G090300 5.0kb upstream 5.0kb upstream 11574 true Chr10: 34335854-34347427 Phaseolus vulgaris
Phvul.010G090300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34342428-34347427 Phaseolus vulgaris
Phvul.010G090300 5.0kb downstream 5.0kb downstream 11574 true Chr10: 34330854-34342427 Phaseolus vulgaris
Phvul.010G090300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34330854-34335853 Phaseolus vulgaris
Phvul.010G090300 10.0kb upstream 10.0kb upstream 16574 true Chr10: 34335854-34352427 Phaseolus vulgaris
Phvul.010G090300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34342428-34352427 Phaseolus vulgaris
Phvul.010G090300 10.0kb downstream 10.0kb downstream 16574 true Chr10: 34325854-34342427 Phaseolus vulgaris
Phvul.010G090300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34325854-34335853 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312921 5265 Fabidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.95612 0.0 15.5636    
cufflinks 11.3602 0.0 29.3953    
cufflinks 9.98035 0.0 25.7977    
cufflinks 11.2635 0.0 29.1387    
cufflinks 10.7393 0.0 27.7709    
cufflinks 19.1492 0.0 50.5663    
cufflinks 0.519512 0.0 1.7086 Low Low
cufflinks 0.05123 0.0 0.208782 Low Low
cufflinks 1.9725 0.0 5.59403    
cufflinks 15.7816 0.0 41.2164    
cufflinks 10.2084 0.0 26.392    

0 Strain