Gene : Phvul.010G090500 P. vulgaris v2.1
Defline:  (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Genomic Order:  899
Name:  ? Phvul.010G090500 Secondary Identifier:  ? PAC:37143212
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G090500 0.5kb upstream 0.5kb upstream 4883 true Chr10: 34390215-34395097 Phaseolus vulgaris
Phvul.010G090500 0.5kb upstream 0.5kb upstream 500 false Chr10: 34394598-34395097 Phaseolus vulgaris
Phvul.010G090500 0.5kb downstream 0.5kb downstream 4883 true Chr10: 34389715-34394597 Phaseolus vulgaris
Phvul.010G090500 0.5kb downstream 0.5kb downstream 500 false Chr10: 34389715-34390214 Phaseolus vulgaris
Phvul.010G090500 1.0kb upstream 1.0kb upstream 5383 true Chr10: 34390215-34395597 Phaseolus vulgaris
Phvul.010G090500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34394598-34395597 Phaseolus vulgaris
Phvul.010G090500 1.0kb downstream 1.0kb downstream 5383 true Chr10: 34389215-34394597 Phaseolus vulgaris
Phvul.010G090500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34389215-34390214 Phaseolus vulgaris
Phvul.010G090500 2.0kb upstream 2.0kb upstream 6383 true Chr10: 34390215-34396597 Phaseolus vulgaris
Phvul.010G090500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34394598-34396597 Phaseolus vulgaris
Phvul.010G090500 2.0kb downstream 2.0kb downstream 6383 true Chr10: 34388215-34394597 Phaseolus vulgaris
Phvul.010G090500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34388215-34390214 Phaseolus vulgaris
Phvul.010G090500 5.0kb upstream 5.0kb upstream 9383 true Chr10: 34390215-34399597 Phaseolus vulgaris
Phvul.010G090500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34394598-34399597 Phaseolus vulgaris
Phvul.010G090500 5.0kb downstream 5.0kb downstream 9383 true Chr10: 34385215-34394597 Phaseolus vulgaris
Phvul.010G090500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34385215-34390214 Phaseolus vulgaris
Phvul.010G090500 10.0kb upstream 10.0kb upstream 14383 true Chr10: 34390215-34404597 Phaseolus vulgaris
Phvul.010G090500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34394598-34404597 Phaseolus vulgaris
Phvul.010G090500 10.0kb downstream 10.0kb downstream 14383 true Chr10: 34380215-34394597 Phaseolus vulgaris
Phvul.010G090500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34380215-34390214 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303259 5265 Fabidae View MSA
124062748 5270 Rosid View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.0204 0.0 64.8351   High
cufflinks 21.2594 0.0 54.9571    
cufflinks 22.2283 0.0 57.4582    
cufflinks 24.9143 0.0 64.5279    
cufflinks 20.5298 0.0 53.0702    
cufflinks 15.6798 0.0 40.6566   Low
cufflinks 20.1461 0.0 52.0743    
cufflinks 18.1695 0.0 46.9961   Low
cufflinks 27.1862 0.0 70.6241   High
cufflinks 21.6593 0.0 55.9969    
cufflinks 21.3282 0.0 55.1335    

0 Strain