Gene : Phvul.006G032900 P. vulgaris v2.1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  282
Name:  ? Phvul.006G032900 Secondary Identifier:  ? PAC:37174028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G032900 0.5kb upstream 0.5kb upstream 1502 true Chr06: 12518532-12520033 Phaseolus vulgaris
Phvul.006G032900 0.5kb upstream 0.5kb upstream 500 false Chr06: 12518532-12519031 Phaseolus vulgaris
Phvul.006G032900 0.5kb downstream 0.5kb downstream 1502 true Chr06: 12519032-12520533 Phaseolus vulgaris
Phvul.006G032900 0.5kb downstream 0.5kb downstream 500 false Chr06: 12520034-12520533 Phaseolus vulgaris
Phvul.006G032900 1.0kb upstream 1.0kb upstream 2002 true Chr06: 12518032-12520033 Phaseolus vulgaris
Phvul.006G032900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12518032-12519031 Phaseolus vulgaris
Phvul.006G032900 1.0kb downstream 1.0kb downstream 2002 true Chr06: 12519032-12521033 Phaseolus vulgaris
Phvul.006G032900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12520034-12521033 Phaseolus vulgaris
Phvul.006G032900 2.0kb upstream 2.0kb upstream 3002 true Chr06: 12517032-12520033 Phaseolus vulgaris
Phvul.006G032900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12517032-12519031 Phaseolus vulgaris
Phvul.006G032900 2.0kb downstream 2.0kb downstream 3002 true Chr06: 12519032-12522033 Phaseolus vulgaris
Phvul.006G032900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12520034-12522033 Phaseolus vulgaris
Phvul.006G032900 5.0kb upstream 5.0kb upstream 6002 true Chr06: 12514032-12520033 Phaseolus vulgaris
Phvul.006G032900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12514032-12519031 Phaseolus vulgaris
Phvul.006G032900 5.0kb downstream 5.0kb downstream 6002 true Chr06: 12519032-12525033 Phaseolus vulgaris
Phvul.006G032900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12520034-12525033 Phaseolus vulgaris
Phvul.006G032900 10.0kb upstream 10.0kb upstream 11002 true Chr06: 12509032-12520033 Phaseolus vulgaris
Phvul.006G032900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12509032-12519031 Phaseolus vulgaris
Phvul.006G032900 10.0kb downstream 10.0kb downstream 11002 true Chr06: 12519032-12530033 Phaseolus vulgaris
Phvul.006G032900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12520034-12530033 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300137 5265 Fabidae View MSA
124065171 5270 Rosid View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10334 0.0 7.08706    
cufflinks 0.183926 0.0 0.767443 Low  
cufflinks 0.181735 0.0 0.76305 Low  
cufflinks 54.3476 0.0 140.749 High High
cufflinks 0.588932 0.0 2.23802 Low  
cufflinks 0.12746 0.0 0.549979 Low  
cufflinks 0.337332 0.0 1.3319 Low  
cufflinks 0.129945 0.0 0.557029 Low  
cufflinks 1.60082 0.0 5.52517    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.67658 0.0 2.53291    

0 Strain