Gene : Phvul.010G089300 P. vulgaris v2.1
Defline:  (1 of 1) K12161 - ubiquitin related modifier 1 (URM1) Genomic Order:  887
Name:  ? Phvul.010G089300 Secondary Identifier:  ? PAC:37143374
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G089300 0.5kb upstream 0.5kb upstream 2821 true Chr10: 34060979-34063799 Phaseolus vulgaris
Phvul.010G089300 0.5kb upstream 0.5kb upstream 500 false Chr10: 34060979-34061478 Phaseolus vulgaris
Phvul.010G089300 0.5kb downstream 0.5kb downstream 2821 true Chr10: 34061479-34064299 Phaseolus vulgaris
Phvul.010G089300 0.5kb downstream 0.5kb downstream 500 false Chr10: 34063800-34064299 Phaseolus vulgaris
Phvul.010G089300 1.0kb upstream 1.0kb upstream 3321 true Chr10: 34060479-34063799 Phaseolus vulgaris
Phvul.010G089300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34060479-34061478 Phaseolus vulgaris
Phvul.010G089300 1.0kb downstream 1.0kb downstream 3321 true Chr10: 34061479-34064799 Phaseolus vulgaris
Phvul.010G089300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34063800-34064799 Phaseolus vulgaris
Phvul.010G089300 2.0kb upstream 2.0kb upstream 4321 true Chr10: 34059479-34063799 Phaseolus vulgaris
Phvul.010G089300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34059479-34061478 Phaseolus vulgaris
Phvul.010G089300 2.0kb downstream 2.0kb downstream 4321 true Chr10: 34061479-34065799 Phaseolus vulgaris
Phvul.010G089300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34063800-34065799 Phaseolus vulgaris
Phvul.010G089300 5.0kb upstream 5.0kb upstream 7321 true Chr10: 34056479-34063799 Phaseolus vulgaris
Phvul.010G089300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34056479-34061478 Phaseolus vulgaris
Phvul.010G089300 5.0kb downstream 5.0kb downstream 7321 true Chr10: 34061479-34068799 Phaseolus vulgaris
Phvul.010G089300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34063800-34068799 Phaseolus vulgaris
Phvul.010G089300 10.0kb upstream 10.0kb upstream 12321 true Chr10: 34051479-34063799 Phaseolus vulgaris
Phvul.010G089300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34051479-34061478 Phaseolus vulgaris
Phvul.010G089300 10.0kb downstream 10.0kb downstream 12321 true Chr10: 34061479-34073799 Phaseolus vulgaris
Phvul.010G089300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34063800-34073799 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300531 5265 Fabidae View MSA
124062744 5270 Rosid View MSA
123740822 5271 Pentapetalae View MSA
122787578 5272 Eudicot View MSA
122042702 5273 Angiosperm View MSA
121349915 5274 Embryophyte View MSA
123424285 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.7984 0.0 122.362 High  
cufflinks 36.072 0.0 95.7331 High  
cufflinks 16.3985 0.0 46.3509   Low
cufflinks 75.2981 0.0 194.788 High High
cufflinks 31.028 0.0 83.9603    
cufflinks 13.5616 0.0 39.1477   Low
cufflinks 26.9799 0.0 73.2951    
cufflinks 46.4588 0.0 121.543 High  
cufflinks 21.2648 0.0 59.1715    
cufflinks 29.1316 0.0 78.8837    
cufflinks 37.1939 0.0 98.8629 High  

0 Strain