Gene : Phvul.010G072800 P. vulgaris v2.1
Genomic Order:  707 Name:  ? Phvul.010G072800
Secondary Identifier:  ? PAC:37142734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G072800 0.5kb upstream 0.5kb upstream 4367 true Chr10: 20173958-20178324 Phaseolus vulgaris
Phvul.010G072800 0.5kb upstream 0.5kb upstream 500 false Chr10: 20177825-20178324 Phaseolus vulgaris
Phvul.010G072800 0.5kb downstream 0.5kb downstream 4367 true Chr10: 20173458-20177824 Phaseolus vulgaris
Phvul.010G072800 0.5kb downstream 0.5kb downstream 500 false Chr10: 20173458-20173957 Phaseolus vulgaris
Phvul.010G072800 1.0kb upstream 1.0kb upstream 4867 true Chr10: 20173958-20178824 Phaseolus vulgaris
Phvul.010G072800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20177825-20178824 Phaseolus vulgaris
Phvul.010G072800 1.0kb downstream 1.0kb downstream 4867 true Chr10: 20172958-20177824 Phaseolus vulgaris
Phvul.010G072800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20172958-20173957 Phaseolus vulgaris
Phvul.010G072800 2.0kb upstream 2.0kb upstream 5867 true Chr10: 20173958-20179824 Phaseolus vulgaris
Phvul.010G072800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20177825-20179824 Phaseolus vulgaris
Phvul.010G072800 2.0kb downstream 2.0kb downstream 5867 true Chr10: 20171958-20177824 Phaseolus vulgaris
Phvul.010G072800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20171958-20173957 Phaseolus vulgaris
Phvul.010G072800 5.0kb upstream 5.0kb upstream 8867 true Chr10: 20173958-20182824 Phaseolus vulgaris
Phvul.010G072800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20177825-20182824 Phaseolus vulgaris
Phvul.010G072800 5.0kb downstream 5.0kb downstream 8867 true Chr10: 20168958-20177824 Phaseolus vulgaris
Phvul.010G072800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20168958-20173957 Phaseolus vulgaris
Phvul.010G072800 10.0kb upstream 10.0kb upstream 13867 true Chr10: 20173958-20187824 Phaseolus vulgaris
Phvul.010G072800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20177825-20187824 Phaseolus vulgaris
Phvul.010G072800 10.0kb downstream 10.0kb downstream 13867 true Chr10: 20163958-20177824 Phaseolus vulgaris
Phvul.010G072800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20163958-20173957 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304900 5265 Fabidae View MSA
124067419 5270 Rosid View MSA
123741379 5271 Pentapetalae View MSA
122789225 5272 Eudicot View MSA
122047134 5273 Angiosperm View MSA
121347972 5274 Embryophyte View MSA
123380696 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.67468 0.0 6.98823   Low
cufflinks 3.83254 0.0 13.0459    
cufflinks 5.23552 0.0 16.7928    
cufflinks 4.04643 0.0 16.1073    
cufflinks 4.38747 0.0 14.709    
cufflinks 5.89124 0.0 18.432   High
cufflinks 4.74301 0.0 15.4261    
cufflinks 5.55012 0.0 17.4448    
cufflinks 4.58806 0.0 17.5093    
cufflinks 3.12967 0.0 11.1844    
cufflinks 4.63875 0.0 17.6824    

0 Strain