Gene : Phvul.006G019800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11595:SF24 - ELONGATION FACTOR 1-BETA 1-RELATED Genomic Order:  69
Name:  ? Phvul.006G019800 Secondary Identifier:  ? PAC:37172334
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G019800 0.5kb upstream 0.5kb upstream 2533 true Chr06: 4070632-4073164 Phaseolus vulgaris
Phvul.006G019800 0.5kb upstream 0.5kb upstream 500 false Chr06: 4070632-4071131 Phaseolus vulgaris
Phvul.006G019800 0.5kb downstream 0.5kb downstream 2533 true Chr06: 4071132-4073664 Phaseolus vulgaris
Phvul.006G019800 0.5kb downstream 0.5kb downstream 500 false Chr06: 4073165-4073664 Phaseolus vulgaris
Phvul.006G019800 1.0kb upstream 1.0kb upstream 3033 true Chr06: 4070132-4073164 Phaseolus vulgaris
Phvul.006G019800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4070132-4071131 Phaseolus vulgaris
Phvul.006G019800 1.0kb downstream 1.0kb downstream 3033 true Chr06: 4071132-4074164 Phaseolus vulgaris
Phvul.006G019800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4073165-4074164 Phaseolus vulgaris
Phvul.006G019800 2.0kb upstream 2.0kb upstream 4033 true Chr06: 4069132-4073164 Phaseolus vulgaris
Phvul.006G019800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4069132-4071131 Phaseolus vulgaris
Phvul.006G019800 2.0kb downstream 2.0kb downstream 4033 true Chr06: 4071132-4075164 Phaseolus vulgaris
Phvul.006G019800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4073165-4075164 Phaseolus vulgaris
Phvul.006G019800 5.0kb upstream 5.0kb upstream 7033 true Chr06: 4066132-4073164 Phaseolus vulgaris
Phvul.006G019800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4066132-4071131 Phaseolus vulgaris
Phvul.006G019800 5.0kb downstream 5.0kb downstream 7033 true Chr06: 4071132-4078164 Phaseolus vulgaris
Phvul.006G019800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4073165-4078164 Phaseolus vulgaris
Phvul.006G019800 10.0kb upstream 10.0kb upstream 12033 true Chr06: 4061132-4073164 Phaseolus vulgaris
Phvul.006G019800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4061132-4071131 Phaseolus vulgaris
Phvul.006G019800 10.0kb downstream 10.0kb downstream 12033 true Chr06: 4071132-4083164 Phaseolus vulgaris
Phvul.006G019800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4073165-4083164 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308515 5265 Fabidae View MSA
124069171 5270 Rosid View MSA
123737749 5271 Pentapetalae View MSA
122793737 5272 Eudicot View MSA
122043548 5273 Angiosperm View MSA
121344333 5274 Embryophyte View MSA
123425760 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.5095 0.0 109.893 High High
cufflinks 34.6134 0.0 89.5792 High  
cufflinks 37.0836 0.0 95.8753    
cufflinks 41.947 0.0 108.426 High High
cufflinks 34.5631 0.0 89.5363 High  
cufflinks 21.6094 0.0 56.8478   Low
cufflinks 22.3391 0.0 58.6429   Low
cufflinks 22.9087 0.0 60.1078    
cufflinks 21.9994 0.0 57.8509   Low
cufflinks 24.116 0.0 63.244    
cufflinks 40.7188 0.0 105.257 High High

0 Strain