Gene : Phvul.006G020200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10641:SF540 - MYB TRANSCRIPTION FACTOR Genomic Order:  153
Name:  ? Phvul.006G020200 Secondary Identifier:  ? PAC:37173306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G020200 0.5kb upstream 0.5kb upstream 6251 true Chr06: 8413530-8419780 Phaseolus vulgaris
Phvul.006G020200 0.5kb upstream 0.5kb upstream 500 false Chr06: 8413530-8414029 Phaseolus vulgaris
Phvul.006G020200 0.5kb downstream 0.5kb downstream 6251 true Chr06: 8414030-8420280 Phaseolus vulgaris
Phvul.006G020200 0.5kb downstream 0.5kb downstream 500 false Chr06: 8419781-8420280 Phaseolus vulgaris
Phvul.006G020200 1.0kb upstream 1.0kb upstream 6751 true Chr06: 8413030-8419780 Phaseolus vulgaris
Phvul.006G020200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8413030-8414029 Phaseolus vulgaris
Phvul.006G020200 1.0kb downstream 1.0kb downstream 6751 true Chr06: 8414030-8420780 Phaseolus vulgaris
Phvul.006G020200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8419781-8420780 Phaseolus vulgaris
Phvul.006G020200 2.0kb upstream 2.0kb upstream 7751 true Chr06: 8412030-8419780 Phaseolus vulgaris
Phvul.006G020200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8412030-8414029 Phaseolus vulgaris
Phvul.006G020200 2.0kb downstream 2.0kb downstream 7751 true Chr06: 8414030-8421780 Phaseolus vulgaris
Phvul.006G020200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8419781-8421780 Phaseolus vulgaris
Phvul.006G020200 5.0kb upstream 5.0kb upstream 10751 true Chr06: 8409030-8419780 Phaseolus vulgaris
Phvul.006G020200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8409030-8414029 Phaseolus vulgaris
Phvul.006G020200 5.0kb downstream 5.0kb downstream 10751 true Chr06: 8414030-8424780 Phaseolus vulgaris
Phvul.006G020200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8419781-8424780 Phaseolus vulgaris
Phvul.006G020200 10.0kb upstream 10.0kb upstream 15751 true Chr06: 8404030-8419780 Phaseolus vulgaris
Phvul.006G020200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8404030-8414029 Phaseolus vulgaris
Phvul.006G020200 10.0kb downstream 10.0kb downstream 15751 true Chr06: 8414030-8429780 Phaseolus vulgaris
Phvul.006G020200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8419781-8429780 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254785 5265 Fabidae View MSA
124070985 5270 Rosid View MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.460051 0.0 1.66592   Low
cufflinks 0.502232 0.0 1.81061   Low
cufflinks 1.88166 0.0 5.8593   High
cufflinks 0.584661 0.0 2.09088    
cufflinks 1.30854 0.0 4.29266    
cufflinks 1.09291 0.0 3.62587    
cufflinks 0.854507 0.0 2.91208    
cufflinks 1.06001 0.0 3.50595    
cufflinks 0.845909 0.0 2.89794    
cufflinks 1.19036 0.0 3.91622    
cufflinks 0.62411 0.0 2.21471    

0 Strain