Gene : Phvul.010G071530 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13773//PTHR13773:SF13 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  664
Name:  ? Phvul.010G071530 Secondary Identifier:  ? PAC:37143247
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1319 Phaseolus vulgaris pathologic  
Pvulgaris PWY4FS-7 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G071530 0.5kb upstream 0.5kb upstream 8233 true Chr10: 15365483-15373715 Phaseolus vulgaris
Phvul.010G071530 0.5kb upstream 0.5kb upstream 500 false Chr10: 15373216-15373715 Phaseolus vulgaris
Phvul.010G071530 0.5kb downstream 0.5kb downstream 8233 true Chr10: 15364983-15373215 Phaseolus vulgaris
Phvul.010G071530 0.5kb downstream 0.5kb downstream 500 false Chr10: 15364983-15365482 Phaseolus vulgaris
Phvul.010G071530 1.0kb upstream 1.0kb upstream 8733 true Chr10: 15365483-15374215 Phaseolus vulgaris
Phvul.010G071530 1.0kb upstream 1.0kb upstream 1000 false Chr10: 15373216-15374215 Phaseolus vulgaris
Phvul.010G071530 1.0kb downstream 1.0kb downstream 8733 true Chr10: 15364483-15373215 Phaseolus vulgaris
Phvul.010G071530 1.0kb downstream 1.0kb downstream 1000 false Chr10: 15364483-15365482 Phaseolus vulgaris
Phvul.010G071530 2.0kb upstream 2.0kb upstream 9733 true Chr10: 15365483-15375215 Phaseolus vulgaris
Phvul.010G071530 2.0kb upstream 2.0kb upstream 2000 false Chr10: 15373216-15375215 Phaseolus vulgaris
Phvul.010G071530 2.0kb downstream 2.0kb downstream 9733 true Chr10: 15363483-15373215 Phaseolus vulgaris
Phvul.010G071530 2.0kb downstream 2.0kb downstream 2000 false Chr10: 15363483-15365482 Phaseolus vulgaris
Phvul.010G071530 5.0kb upstream 5.0kb upstream 12733 true Chr10: 15365483-15378215 Phaseolus vulgaris
Phvul.010G071530 5.0kb upstream 5.0kb upstream 5000 false Chr10: 15373216-15378215 Phaseolus vulgaris
Phvul.010G071530 5.0kb downstream 5.0kb downstream 12733 true Chr10: 15360483-15373215 Phaseolus vulgaris
Phvul.010G071530 5.0kb downstream 5.0kb downstream 5000 false Chr10: 15360483-15365482 Phaseolus vulgaris
Phvul.010G071530 10.0kb upstream 10.0kb upstream 17733 true Chr10: 15365483-15383215 Phaseolus vulgaris
Phvul.010G071530 10.0kb upstream 10.0kb upstream 10000 false Chr10: 15373216-15383215 Phaseolus vulgaris
Phvul.010G071530 10.0kb downstream 10.0kb downstream 17733 true Chr10: 15355483-15373215 Phaseolus vulgaris
Phvul.010G071530 10.0kb downstream 10.0kb downstream 10000 false Chr10: 15355483-15365482 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302445 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.4091 0.0 102.362 High High
cufflinks 20.3037 0.0 52.782   Low
cufflinks 54.4647 0.0 143.76 High High
cufflinks 30.7919 0.0 79.5928    
cufflinks 27.5705 0.0 71.3023    
cufflinks 27.6153 0.0 71.3872    
cufflinks 21.7366 0.0 56.4736    
cufflinks 23.0509 0.0 59.678    
cufflinks 30.9186 0.0 79.9244 High  
cufflinks 24.4811 0.0 63.3537    
cufflinks 21.2489 0.0 55.2734    

0 Strain