Gene : Phvul.006G021700 P. vulgaris v2.1
Defline:  (1 of 6) K16296 - serine carboxypeptidase-like clade I [EC:3.4.16.-] (SCPL-I) Genomic Order:  167
Name:  ? Phvul.006G021700 Secondary Identifier:  ? PAC:37171619
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G021700 0.5kb upstream 0.5kb upstream 16163 true Chr06: 8922713-8938875 Phaseolus vulgaris
Phvul.006G021700 0.5kb upstream 0.5kb upstream 500 false Chr06: 8938376-8938875 Phaseolus vulgaris
Phvul.006G021700 0.5kb downstream 0.5kb downstream 16163 true Chr06: 8922213-8938375 Phaseolus vulgaris
Phvul.006G021700 0.5kb downstream 0.5kb downstream 500 false Chr06: 8922213-8922712 Phaseolus vulgaris
Phvul.006G021700 1.0kb upstream 1.0kb upstream 16663 true Chr06: 8922713-8939375 Phaseolus vulgaris
Phvul.006G021700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8938376-8939375 Phaseolus vulgaris
Phvul.006G021700 1.0kb downstream 1.0kb downstream 16663 true Chr06: 8921713-8938375 Phaseolus vulgaris
Phvul.006G021700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8921713-8922712 Phaseolus vulgaris
Phvul.006G021700 2.0kb upstream 2.0kb upstream 17663 true Chr06: 8922713-8940375 Phaseolus vulgaris
Phvul.006G021700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8938376-8940375 Phaseolus vulgaris
Phvul.006G021700 2.0kb downstream 2.0kb downstream 17663 true Chr06: 8920713-8938375 Phaseolus vulgaris
Phvul.006G021700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8920713-8922712 Phaseolus vulgaris
Phvul.006G021700 5.0kb upstream 5.0kb upstream 20663 true Chr06: 8922713-8943375 Phaseolus vulgaris
Phvul.006G021700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8938376-8943375 Phaseolus vulgaris
Phvul.006G021700 5.0kb downstream 5.0kb downstream 20663 true Chr06: 8917713-8938375 Phaseolus vulgaris
Phvul.006G021700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8917713-8922712 Phaseolus vulgaris
Phvul.006G021700 10.0kb upstream 10.0kb upstream 25663 true Chr06: 8922713-8948375 Phaseolus vulgaris
Phvul.006G021700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8938376-8948375 Phaseolus vulgaris
Phvul.006G021700 10.0kb downstream 10.0kb downstream 25663 true Chr06: 8912713-8938375 Phaseolus vulgaris
Phvul.006G021700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8912713-8922712 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296231 5265 Fabidae View MSA
124072597 5270 Rosid View MSA
123628166 5271 Pentapetalae View MSA
122662461 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51093 0.0 9.89336    
cufflinks 3.18546 0.0 14.258    
cufflinks 1.14079 0.0 4.80712    
cufflinks 1.72117 0.0 8.55212    
cufflinks 0.79166 0.0 5.09371   Low
cufflinks 2.34115 0.0 14.0864    
cufflinks 9.37197 0.0 39.6036   High
cufflinks 10.5089 0.0 43.0895   High
cufflinks 7.79444 0.0 38.7244   High
cufflinks 3.39315 0.0 20.1373    
cufflinks 1.08433 0.0 6.12343    

0 Strain