Gene : Phvul.010G076200 P. vulgaris v2.1
Defline:  (1 of 2) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Genomic Order:  790
Name:  ? Phvul.010G076200 Secondary Identifier:  ? PAC:37143338
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6013 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G076200 0.5kb upstream 0.5kb upstream 3886 true Chr10: 28037674-28041559 Phaseolus vulgaris
Phvul.010G076200 0.5kb upstream 0.5kb upstream 500 false Chr10: 28041060-28041559 Phaseolus vulgaris
Phvul.010G076200 0.5kb downstream 0.5kb downstream 3886 true Chr10: 28037174-28041059 Phaseolus vulgaris
Phvul.010G076200 0.5kb downstream 0.5kb downstream 500 false Chr10: 28037174-28037673 Phaseolus vulgaris
Phvul.010G076200 1.0kb upstream 1.0kb upstream 4386 true Chr10: 28037674-28042059 Phaseolus vulgaris
Phvul.010G076200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28041060-28042059 Phaseolus vulgaris
Phvul.010G076200 1.0kb downstream 1.0kb downstream 4386 true Chr10: 28036674-28041059 Phaseolus vulgaris
Phvul.010G076200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28036674-28037673 Phaseolus vulgaris
Phvul.010G076200 2.0kb upstream 2.0kb upstream 5386 true Chr10: 28037674-28043059 Phaseolus vulgaris
Phvul.010G076200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28041060-28043059 Phaseolus vulgaris
Phvul.010G076200 2.0kb downstream 2.0kb downstream 5386 true Chr10: 28035674-28041059 Phaseolus vulgaris
Phvul.010G076200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28035674-28037673 Phaseolus vulgaris
Phvul.010G076200 5.0kb upstream 5.0kb upstream 8386 true Chr10: 28037674-28046059 Phaseolus vulgaris
Phvul.010G076200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28041060-28046059 Phaseolus vulgaris
Phvul.010G076200 5.0kb downstream 5.0kb downstream 8386 true Chr10: 28032674-28041059 Phaseolus vulgaris
Phvul.010G076200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28032674-28037673 Phaseolus vulgaris
Phvul.010G076200 10.0kb upstream 10.0kb upstream 13386 true Chr10: 28037674-28051059 Phaseolus vulgaris
Phvul.010G076200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28041060-28051059 Phaseolus vulgaris
Phvul.010G076200 10.0kb downstream 10.0kb downstream 13386 true Chr10: 28027674-28041059 Phaseolus vulgaris
Phvul.010G076200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28027674-28037673 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311667 5265 Fabidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0086 0.0 36.4413    
cufflinks 23.3056 0.0 60.2856    
cufflinks 203.984 0.0 663.051 High High
cufflinks 33.3149 0.0 86.7973    
cufflinks 21.3848 0.0 55.2766    
cufflinks 84.4617 0.0 239.041 High High
cufflinks 2.38088 0.0 7.2023   Low
cufflinks 3.35822 0.0 9.73473   Low
cufflinks 3.05414 0.0 9.00103   Low
cufflinks 38.3472 0.0 100.841 High  
cufflinks 19.0058 0.0 49.1553    

0 Strain