Gene : Phvul.006G021200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Genomic Order:  162
Name:  ? Phvul.006G021200 Secondary Identifier:  ? PAC:37174004
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G021200 0.5kb upstream 0.5kb upstream 9503 true Chr06: 8724726-8734228 Phaseolus vulgaris
Phvul.006G021200 0.5kb upstream 0.5kb upstream 500 false Chr06: 8733729-8734228 Phaseolus vulgaris
Phvul.006G021200 0.5kb downstream 0.5kb downstream 9503 true Chr06: 8724226-8733728 Phaseolus vulgaris
Phvul.006G021200 0.5kb downstream 0.5kb downstream 500 false Chr06: 8724226-8724725 Phaseolus vulgaris
Phvul.006G021200 1.0kb upstream 1.0kb upstream 10003 true Chr06: 8724726-8734728 Phaseolus vulgaris
Phvul.006G021200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8733729-8734728 Phaseolus vulgaris
Phvul.006G021200 1.0kb downstream 1.0kb downstream 10003 true Chr06: 8723726-8733728 Phaseolus vulgaris
Phvul.006G021200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8723726-8724725 Phaseolus vulgaris
Phvul.006G021200 2.0kb upstream 2.0kb upstream 11003 true Chr06: 8724726-8735728 Phaseolus vulgaris
Phvul.006G021200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8733729-8735728 Phaseolus vulgaris
Phvul.006G021200 2.0kb downstream 2.0kb downstream 11003 true Chr06: 8722726-8733728 Phaseolus vulgaris
Phvul.006G021200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8722726-8724725 Phaseolus vulgaris
Phvul.006G021200 5.0kb upstream 5.0kb upstream 14003 true Chr06: 8724726-8738728 Phaseolus vulgaris
Phvul.006G021200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8733729-8738728 Phaseolus vulgaris
Phvul.006G021200 5.0kb downstream 5.0kb downstream 14003 true Chr06: 8719726-8733728 Phaseolus vulgaris
Phvul.006G021200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8719726-8724725 Phaseolus vulgaris
Phvul.006G021200 10.0kb upstream 10.0kb upstream 19003 true Chr06: 8724726-8743728 Phaseolus vulgaris
Phvul.006G021200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8733729-8743728 Phaseolus vulgaris
Phvul.006G021200 10.0kb downstream 10.0kb downstream 19003 true Chr06: 8714726-8733728 Phaseolus vulgaris
Phvul.006G021200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8714726-8724725 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309915 5265 Fabidae View MSA
124060995 5270 Rosid View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0215 0.0 28.5138   Low
cufflinks 25.8598 0.0 68.3723    
cufflinks 21.3559 0.0 55.932    
cufflinks 11.9578 0.0 30.944   Low
cufflinks 24.2834 0.0 63.7486    
cufflinks 32.5421 0.0 87.6724   High
cufflinks 22.5378 0.0 59.1163    
cufflinks 24.8801 0.0 65.8149    
cufflinks 21.7595 0.0 56.8822    
cufflinks 34.3453 0.0 92.7747   High
cufflinks 24.7291 0.0 65.0196    

0 Strain