Gene : Phvul.006G021300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24193:SF83 - ANKYRIN REPEAT-CONTAINING PROTEIN Genomic Order:  163
Name:  ? Phvul.006G021300 Secondary Identifier:  ? PAC:37174064
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G021300 0.5kb upstream 0.5kb upstream 4541 true Chr06: 8734755-8739295 Phaseolus vulgaris
Phvul.006G021300 0.5kb upstream 0.5kb upstream 500 false Chr06: 8734755-8735254 Phaseolus vulgaris
Phvul.006G021300 0.5kb downstream 0.5kb downstream 4541 true Chr06: 8735255-8739795 Phaseolus vulgaris
Phvul.006G021300 0.5kb downstream 0.5kb downstream 500 false Chr06: 8739296-8739795 Phaseolus vulgaris
Phvul.006G021300 1.0kb upstream 1.0kb upstream 5041 true Chr06: 8734255-8739295 Phaseolus vulgaris
Phvul.006G021300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8734255-8735254 Phaseolus vulgaris
Phvul.006G021300 1.0kb downstream 1.0kb downstream 5041 true Chr06: 8735255-8740295 Phaseolus vulgaris
Phvul.006G021300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8739296-8740295 Phaseolus vulgaris
Phvul.006G021300 2.0kb upstream 2.0kb upstream 6041 true Chr06: 8733255-8739295 Phaseolus vulgaris
Phvul.006G021300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8733255-8735254 Phaseolus vulgaris
Phvul.006G021300 2.0kb downstream 2.0kb downstream 6041 true Chr06: 8735255-8741295 Phaseolus vulgaris
Phvul.006G021300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8739296-8741295 Phaseolus vulgaris
Phvul.006G021300 5.0kb upstream 5.0kb upstream 9041 true Chr06: 8730255-8739295 Phaseolus vulgaris
Phvul.006G021300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8730255-8735254 Phaseolus vulgaris
Phvul.006G021300 5.0kb downstream 5.0kb downstream 9041 true Chr06: 8735255-8744295 Phaseolus vulgaris
Phvul.006G021300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8739296-8744295 Phaseolus vulgaris
Phvul.006G021300 10.0kb upstream 10.0kb upstream 14041 true Chr06: 8725255-8739295 Phaseolus vulgaris
Phvul.006G021300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8725255-8735254 Phaseolus vulgaris
Phvul.006G021300 10.0kb downstream 10.0kb downstream 14041 true Chr06: 8735255-8749295 Phaseolus vulgaris
Phvul.006G021300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8739296-8749295 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305508 5265 Fabidae View MSA
124064792 5270 Rosid View MSA
123738973 5271 Pentapetalae View MSA
122785979 5272 Eudicot View MSA
122045417 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346975 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7523 0.0 69.7346    
cufflinks 26.5387 0.0 96.5035   High
cufflinks 18.6691 0.0 79.3733    
cufflinks 26.1671 0.0 91.5451   High
cufflinks 20.5591 0.0 87.3298    
cufflinks 14.2069 0.0 56.4537   Low
cufflinks 14.8706 0.0 66.9282   Low
cufflinks 17.8191 0.0 75.4363    
cufflinks 14.3997 0.0 65.3616   Low
cufflinks 23.2605 0.0 84.5762    
cufflinks 24.1003 0.0 96.3233    

0 Strain