Gene : Phvul.006G024000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  194
Name:  ? Phvul.006G024000 Secondary Identifier:  ? PAC:37174193
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4203 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5835 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6801 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G024000 0.5kb upstream 0.5kb upstream 3921 true Chr06: 9786535-9790455 Phaseolus vulgaris
Phvul.006G024000 0.5kb upstream 0.5kb upstream 500 false Chr06: 9789956-9790455 Phaseolus vulgaris
Phvul.006G024000 0.5kb downstream 0.5kb downstream 3921 true Chr06: 9786035-9789955 Phaseolus vulgaris
Phvul.006G024000 0.5kb downstream 0.5kb downstream 500 false Chr06: 9786035-9786534 Phaseolus vulgaris
Phvul.006G024000 1.0kb upstream 1.0kb upstream 4421 true Chr06: 9786535-9790955 Phaseolus vulgaris
Phvul.006G024000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9789956-9790955 Phaseolus vulgaris
Phvul.006G024000 1.0kb downstream 1.0kb downstream 4421 true Chr06: 9785535-9789955 Phaseolus vulgaris
Phvul.006G024000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9785535-9786534 Phaseolus vulgaris
Phvul.006G024000 2.0kb upstream 2.0kb upstream 5421 true Chr06: 9786535-9791955 Phaseolus vulgaris
Phvul.006G024000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9789956-9791955 Phaseolus vulgaris
Phvul.006G024000 2.0kb downstream 2.0kb downstream 5421 true Chr06: 9784535-9789955 Phaseolus vulgaris
Phvul.006G024000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9784535-9786534 Phaseolus vulgaris
Phvul.006G024000 5.0kb upstream 5.0kb upstream 8421 true Chr06: 9786535-9794955 Phaseolus vulgaris
Phvul.006G024000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9789956-9794955 Phaseolus vulgaris
Phvul.006G024000 5.0kb downstream 5.0kb downstream 8421 true Chr06: 9781535-9789955 Phaseolus vulgaris
Phvul.006G024000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9781535-9786534 Phaseolus vulgaris
Phvul.006G024000 10.0kb upstream 10.0kb upstream 13421 true Chr06: 9786535-9799955 Phaseolus vulgaris
Phvul.006G024000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9789956-9799955 Phaseolus vulgaris
Phvul.006G024000 10.0kb downstream 10.0kb downstream 13421 true Chr06: 9776535-9789955 Phaseolus vulgaris
Phvul.006G024000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9776535-9786534 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314012 5265 Fabidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.0547 0.0 127.526 High High
cufflinks 3.63985 0.0 10.6357    
cufflinks 0.116726 0.0 0.477844 Low Low
cufflinks 3.4616 0.0 10.2148    
cufflinks 1.87003 0.0 5.90077    
cufflinks 0.146469 0.0 0.58799 Low Low
cufflinks 9.65217 0.0 25.7022    
cufflinks 5.23246 0.0 14.7105    
cufflinks 24.5194 0.0 63.4162   High
cufflinks 0.415289 0.0 1.53717    
cufflinks 6.29754 0.0 17.411    

0 Strain