Gene : Phvul.006G022500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  177
Name:  ? Phvul.006G022500 Secondary Identifier:  ? PAC:37172966
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7574 Phaseolus vulgaris pathologic  
Pvulgaris VALDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G022500 0.5kb upstream 0.5kb upstream 6231 true Chr06: 9165550-9171780 Phaseolus vulgaris
Phvul.006G022500 0.5kb upstream 0.5kb upstream 500 false Chr06: 9171281-9171780 Phaseolus vulgaris
Phvul.006G022500 0.5kb downstream 0.5kb downstream 6231 true Chr06: 9165050-9171280 Phaseolus vulgaris
Phvul.006G022500 0.5kb downstream 0.5kb downstream 500 false Chr06: 9165050-9165549 Phaseolus vulgaris
Phvul.006G022500 1.0kb upstream 1.0kb upstream 6731 true Chr06: 9165550-9172280 Phaseolus vulgaris
Phvul.006G022500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9171281-9172280 Phaseolus vulgaris
Phvul.006G022500 1.0kb downstream 1.0kb downstream 6731 true Chr06: 9164550-9171280 Phaseolus vulgaris
Phvul.006G022500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9164550-9165549 Phaseolus vulgaris
Phvul.006G022500 2.0kb upstream 2.0kb upstream 7731 true Chr06: 9165550-9173280 Phaseolus vulgaris
Phvul.006G022500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9171281-9173280 Phaseolus vulgaris
Phvul.006G022500 2.0kb downstream 2.0kb downstream 7731 true Chr06: 9163550-9171280 Phaseolus vulgaris
Phvul.006G022500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9163550-9165549 Phaseolus vulgaris
Phvul.006G022500 5.0kb upstream 5.0kb upstream 10731 true Chr06: 9165550-9176280 Phaseolus vulgaris
Phvul.006G022500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9171281-9176280 Phaseolus vulgaris
Phvul.006G022500 5.0kb downstream 5.0kb downstream 10731 true Chr06: 9160550-9171280 Phaseolus vulgaris
Phvul.006G022500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9160550-9165549 Phaseolus vulgaris
Phvul.006G022500 10.0kb upstream 10.0kb upstream 15731 true Chr06: 9165550-9181280 Phaseolus vulgaris
Phvul.006G022500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9171281-9181280 Phaseolus vulgaris
Phvul.006G022500 10.0kb downstream 10.0kb downstream 15731 true Chr06: 9155550-9171280 Phaseolus vulgaris
Phvul.006G022500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9155550-9165549 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306191 5265 Fabidae View MSA
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1399 0.0 36.4847    
cufflinks 11.5783 0.0 40.6211    
cufflinks 10.2715 0.0 36.6883    
cufflinks 13.6464 0.0 47.6005    
cufflinks 9.92911 0.0 31.6728   Low
cufflinks 11.2109 0.0 34.2774    
cufflinks 12.8738 0.0 44.8134    
cufflinks 16.4028 0.0 54.264   High
cufflinks 9.45478 0.0 34.8597   Low
cufflinks 12.6925 0.0 38.791    
cufflinks 16.1143 0.0 54.249   High

0 Strain