Gene : Phvul.006G028000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10994:SF62 - RETICULON-LIKE PROTEIN B8 Genomic Order:  223
Name:  ? Phvul.006G028000 Secondary Identifier:  ? PAC:37171795
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G028000 0.5kb upstream 0.5kb upstream 4992 true Chr06: 10646051-10651042 Phaseolus vulgaris
Phvul.006G028000 0.5kb upstream 0.5kb upstream 500 false Chr06: 10646051-10646550 Phaseolus vulgaris
Phvul.006G028000 0.5kb downstream 0.5kb downstream 4992 true Chr06: 10646551-10651542 Phaseolus vulgaris
Phvul.006G028000 0.5kb downstream 0.5kb downstream 500 false Chr06: 10651043-10651542 Phaseolus vulgaris
Phvul.006G028000 1.0kb upstream 1.0kb upstream 5492 true Chr06: 10645551-10651042 Phaseolus vulgaris
Phvul.006G028000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10645551-10646550 Phaseolus vulgaris
Phvul.006G028000 1.0kb downstream 1.0kb downstream 5492 true Chr06: 10646551-10652042 Phaseolus vulgaris
Phvul.006G028000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10651043-10652042 Phaseolus vulgaris
Phvul.006G028000 2.0kb upstream 2.0kb upstream 6492 true Chr06: 10644551-10651042 Phaseolus vulgaris
Phvul.006G028000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10644551-10646550 Phaseolus vulgaris
Phvul.006G028000 2.0kb downstream 2.0kb downstream 6492 true Chr06: 10646551-10653042 Phaseolus vulgaris
Phvul.006G028000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10651043-10653042 Phaseolus vulgaris
Phvul.006G028000 5.0kb upstream 5.0kb upstream 9492 true Chr06: 10641551-10651042 Phaseolus vulgaris
Phvul.006G028000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10641551-10646550 Phaseolus vulgaris
Phvul.006G028000 5.0kb downstream 5.0kb downstream 9492 true Chr06: 10646551-10656042 Phaseolus vulgaris
Phvul.006G028000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10651043-10656042 Phaseolus vulgaris
Phvul.006G028000 10.0kb upstream 10.0kb upstream 14492 true Chr06: 10636551-10651042 Phaseolus vulgaris
Phvul.006G028000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10636551-10646550 Phaseolus vulgaris
Phvul.006G028000 10.0kb downstream 10.0kb downstream 14492 true Chr06: 10646551-10661042 Phaseolus vulgaris
Phvul.006G028000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10651043-10661042 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310765 5265 Fabidae View MSA
124061075 5270 Rosid View MSA
123740052 5271 Pentapetalae View MSA
122787995 5272 Eudicot View MSA
122045587 5273 Angiosperm View MSA
121310470 5274 Embryophyte View MSA
123347943 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.299 0.0 349.649 High High
cufflinks 23.1588 0.0 70.881    
cufflinks 21.0499 0.0 64.9033    
cufflinks 38.4273 0.0 113.466 High  
cufflinks 18.7998 0.0 59.4961    
cufflinks 10.7041 0.0 39.0779   Low
cufflinks 18.2864 0.0 56.3726    
cufflinks 14.7528 0.0 49.1445    
cufflinks 26.4893 0.0 88.652    
cufflinks 25.0328 0.0 76.378    
cufflinks 18.8914 0.0 61.1421    

0 Strain