Gene : Phvul.010G081500 P. vulgaris v2.1
Defline:  (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Genomic Order:  722
Name:  ? Phvul.010G081500 Secondary Identifier:  ? PAC:37144050
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G081500 0.5kb upstream 0.5kb upstream 5377 true Chr10: 22575594-22580970 Phaseolus vulgaris
Phvul.010G081500 0.5kb upstream 0.5kb upstream 500 false Chr10: 22575594-22576093 Phaseolus vulgaris
Phvul.010G081500 0.5kb downstream 0.5kb downstream 5377 true Chr10: 22576094-22581470 Phaseolus vulgaris
Phvul.010G081500 0.5kb downstream 0.5kb downstream 500 false Chr10: 22580971-22581470 Phaseolus vulgaris
Phvul.010G081500 1.0kb upstream 1.0kb upstream 5877 true Chr10: 22575094-22580970 Phaseolus vulgaris
Phvul.010G081500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 22575094-22576093 Phaseolus vulgaris
Phvul.010G081500 1.0kb downstream 1.0kb downstream 5877 true Chr10: 22576094-22581970 Phaseolus vulgaris
Phvul.010G081500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 22580971-22581970 Phaseolus vulgaris
Phvul.010G081500 2.0kb upstream 2.0kb upstream 6877 true Chr10: 22574094-22580970 Phaseolus vulgaris
Phvul.010G081500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 22574094-22576093 Phaseolus vulgaris
Phvul.010G081500 2.0kb downstream 2.0kb downstream 6877 true Chr10: 22576094-22582970 Phaseolus vulgaris
Phvul.010G081500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 22580971-22582970 Phaseolus vulgaris
Phvul.010G081500 5.0kb upstream 5.0kb upstream 9877 true Chr10: 22571094-22580970 Phaseolus vulgaris
Phvul.010G081500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 22571094-22576093 Phaseolus vulgaris
Phvul.010G081500 5.0kb downstream 5.0kb downstream 9877 true Chr10: 22576094-22585970 Phaseolus vulgaris
Phvul.010G081500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 22580971-22585970 Phaseolus vulgaris
Phvul.010G081500 10.0kb upstream 10.0kb upstream 14877 true Chr10: 22566094-22580970 Phaseolus vulgaris
Phvul.010G081500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 22566094-22576093 Phaseolus vulgaris
Phvul.010G081500 10.0kb downstream 10.0kb downstream 14877 true Chr10: 22576094-22590970 Phaseolus vulgaris
Phvul.010G081500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 22580971-22590970 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316484 5265 Fabidae View MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5936 0.0 58.9203   High
cufflinks 14.3568 0.0 38.5528    
cufflinks 12.8274 0.0 34.59   Low
cufflinks 18.1708 0.0 48.1361    
cufflinks 16.4419 0.0 43.906    
cufflinks 12.1552 0.0 33.0751   Low
cufflinks 14.4411 0.0 38.8351    
cufflinks 13.9351 0.0 37.3889    
cufflinks 14.7597 0.0 39.6923    
cufflinks 19.7491 0.0 51.8674   High
cufflinks 16.7129 0.0 44.5114    

0 Strain