Gene : Phvul.010G080500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10804:SF13 - METHIONINE AMINOPEPTIDASE 1 Genomic Order:  644
Name:  ? Phvul.010G080500 Secondary Identifier:  ? PAC:37144068
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G080500 0.5kb upstream 0.5kb upstream 7557 true Chr10: 14415138-14422694 Phaseolus vulgaris
Phvul.010G080500 0.5kb upstream 0.5kb upstream 500 false Chr10: 14415138-14415637 Phaseolus vulgaris
Phvul.010G080500 0.5kb downstream 0.5kb downstream 7557 true Chr10: 14415638-14423194 Phaseolus vulgaris
Phvul.010G080500 0.5kb downstream 0.5kb downstream 500 false Chr10: 14422695-14423194 Phaseolus vulgaris
Phvul.010G080500 1.0kb upstream 1.0kb upstream 8057 true Chr10: 14414638-14422694 Phaseolus vulgaris
Phvul.010G080500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14414638-14415637 Phaseolus vulgaris
Phvul.010G080500 1.0kb downstream 1.0kb downstream 8057 true Chr10: 14415638-14423694 Phaseolus vulgaris
Phvul.010G080500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14422695-14423694 Phaseolus vulgaris
Phvul.010G080500 2.0kb upstream 2.0kb upstream 9057 true Chr10: 14413638-14422694 Phaseolus vulgaris
Phvul.010G080500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14413638-14415637 Phaseolus vulgaris
Phvul.010G080500 2.0kb downstream 2.0kb downstream 9057 true Chr10: 14415638-14424694 Phaseolus vulgaris
Phvul.010G080500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14422695-14424694 Phaseolus vulgaris
Phvul.010G080500 5.0kb upstream 5.0kb upstream 12057 true Chr10: 14410638-14422694 Phaseolus vulgaris
Phvul.010G080500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14410638-14415637 Phaseolus vulgaris
Phvul.010G080500 5.0kb downstream 5.0kb downstream 12057 true Chr10: 14415638-14427694 Phaseolus vulgaris
Phvul.010G080500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14422695-14427694 Phaseolus vulgaris
Phvul.010G080500 10.0kb upstream 10.0kb upstream 17057 true Chr10: 14405638-14422694 Phaseolus vulgaris
Phvul.010G080500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14405638-14415637 Phaseolus vulgaris
Phvul.010G080500 10.0kb downstream 10.0kb downstream 17057 true Chr10: 14415638-14432694 Phaseolus vulgaris
Phvul.010G080500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14422695-14432694 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026230 5273 Angiosperm View MSA
122304175 5265 Fabidae View MSA
124062332 5270 Rosid View MSA
123740512 5271 Pentapetalae View MSA
122787806 5272 Eudicot View MSA
123429177 5275 Viridiplantae View MSA
121350168 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0657 0.0 54.7776    
cufflinks 20.0533 0.0 52.2568    
cufflinks 13.3807 0.0 35.6769    
cufflinks 18.6132 0.0 48.7724    
cufflinks 15.4908 0.0 40.9889    
cufflinks 9.21687 0.0 25.3618   Low
cufflinks 18.9999 0.0 49.6564    
cufflinks 19.6458 0.0 51.2174    
cufflinks 17.8224 0.0 46.76    
cufflinks 19.0548 0.0 49.7709    
cufflinks 15.4876 0.0 40.9964    

0 Strain