Gene : Phvul.006G012700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11119:SF46 - NUCLEOBASE-ASCORBATE TRANSPORTER 1 Genomic Order:  110
Name:  ? Phvul.006G012700 Secondary Identifier:  ? PAC:37173797
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G012700 0.5kb upstream 0.5kb upstream 6915 true Chr06: 5821641-5828555 Phaseolus vulgaris
Phvul.006G012700 0.5kb upstream 0.5kb upstream 500 false Chr06: 5828056-5828555 Phaseolus vulgaris
Phvul.006G012700 0.5kb downstream 0.5kb downstream 6915 true Chr06: 5821141-5828055 Phaseolus vulgaris
Phvul.006G012700 0.5kb downstream 0.5kb downstream 500 false Chr06: 5821141-5821640 Phaseolus vulgaris
Phvul.006G012700 1.0kb upstream 1.0kb upstream 7415 true Chr06: 5821641-5829055 Phaseolus vulgaris
Phvul.006G012700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5828056-5829055 Phaseolus vulgaris
Phvul.006G012700 1.0kb downstream 1.0kb downstream 7415 true Chr06: 5820641-5828055 Phaseolus vulgaris
Phvul.006G012700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5820641-5821640 Phaseolus vulgaris
Phvul.006G012700 2.0kb upstream 2.0kb upstream 8415 true Chr06: 5821641-5830055 Phaseolus vulgaris
Phvul.006G012700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5828056-5830055 Phaseolus vulgaris
Phvul.006G012700 2.0kb downstream 2.0kb downstream 8415 true Chr06: 5819641-5828055 Phaseolus vulgaris
Phvul.006G012700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5819641-5821640 Phaseolus vulgaris
Phvul.006G012700 5.0kb upstream 5.0kb upstream 11415 true Chr06: 5821641-5833055 Phaseolus vulgaris
Phvul.006G012700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5828056-5833055 Phaseolus vulgaris
Phvul.006G012700 5.0kb downstream 5.0kb downstream 11415 true Chr06: 5816641-5828055 Phaseolus vulgaris
Phvul.006G012700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5816641-5821640 Phaseolus vulgaris
Phvul.006G012700 10.0kb upstream 10.0kb upstream 16415 true Chr06: 5821641-5838055 Phaseolus vulgaris
Phvul.006G012700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5828056-5838055 Phaseolus vulgaris
Phvul.006G012700 10.0kb downstream 10.0kb downstream 16415 true Chr06: 5811641-5828055 Phaseolus vulgaris
Phvul.006G012700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5811641-5821640 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303688 5265 Fabidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29184 0.0 7.07143    
cufflinks 5.40429 0.0 22.0505    
cufflinks 4.33106 0.0 15.4578    
cufflinks 4.15239 0.0 15.9894    
cufflinks 4.264 0.0 19.0354    
cufflinks 5.58331 0.0 19.5697   High
cufflinks 2.28096 0.0 10.5967    
cufflinks 1.14262 0.0 6.17049   Low
cufflinks 2.34241 0.0 12.7227    
cufflinks 0.61215 0.0 4.60686   Low
cufflinks 4.00544 0.0 15.5996    

0 Strain