Gene : Phvul.010G060400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23324//PTHR23324:SF45 - SEC14 RELATED PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  574
Name:  ? Phvul.010G060400 Secondary Identifier:  ? PAC:37142737
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G060400 0.5kb upstream 0.5kb upstream 7547 true Chr10: 9426785-9434331 Phaseolus vulgaris
Phvul.010G060400 0.5kb upstream 0.5kb upstream 500 false Chr10: 9426785-9427284 Phaseolus vulgaris
Phvul.010G060400 0.5kb downstream 0.5kb downstream 7547 true Chr10: 9427285-9434831 Phaseolus vulgaris
Phvul.010G060400 0.5kb downstream 0.5kb downstream 500 false Chr10: 9434332-9434831 Phaseolus vulgaris
Phvul.010G060400 1.0kb upstream 1.0kb upstream 8047 true Chr10: 9426285-9434331 Phaseolus vulgaris
Phvul.010G060400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9426285-9427284 Phaseolus vulgaris
Phvul.010G060400 1.0kb downstream 1.0kb downstream 8047 true Chr10: 9427285-9435331 Phaseolus vulgaris
Phvul.010G060400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9434332-9435331 Phaseolus vulgaris
Phvul.010G060400 2.0kb upstream 2.0kb upstream 9047 true Chr10: 9425285-9434331 Phaseolus vulgaris
Phvul.010G060400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9425285-9427284 Phaseolus vulgaris
Phvul.010G060400 2.0kb downstream 2.0kb downstream 9047 true Chr10: 9427285-9436331 Phaseolus vulgaris
Phvul.010G060400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9434332-9436331 Phaseolus vulgaris
Phvul.010G060400 5.0kb upstream 5.0kb upstream 12047 true Chr10: 9422285-9434331 Phaseolus vulgaris
Phvul.010G060400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9422285-9427284 Phaseolus vulgaris
Phvul.010G060400 5.0kb downstream 5.0kb downstream 12047 true Chr10: 9427285-9439331 Phaseolus vulgaris
Phvul.010G060400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9434332-9439331 Phaseolus vulgaris
Phvul.010G060400 10.0kb upstream 10.0kb upstream 17047 true Chr10: 9417285-9434331 Phaseolus vulgaris
Phvul.010G060400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9417285-9427284 Phaseolus vulgaris
Phvul.010G060400 10.0kb downstream 10.0kb downstream 17047 true Chr10: 9427285-9444331 Phaseolus vulgaris
Phvul.010G060400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9434332-9444331 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026525 5273 Angiosperm View MSA
122300278 5265 Fabidae View MSA
124063950 5270 Rosid View MSA
123740798 5271 Pentapetalae View MSA
122786115 5272 Eudicot View MSA
121346667 5274 Embryophyte View MSA
123426655 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1189 0.0 77.9503   High
cufflinks 18.9809 0.0 49.2656   Low
cufflinks 24.3837 0.0 63.0288    
cufflinks 22.2854 0.0 57.7234    
cufflinks 19.1699 0.0 49.8569   Low
cufflinks 17.109 0.0 44.5407   Low
cufflinks 29.3402 0.0 75.8931 High  
cufflinks 27.2768 0.0 70.5393    
cufflinks 30.9921 0.0 80.2103 High High
cufflinks 27.1852 0.0 70.2736    
cufflinks 20.3458 0.0 52.7926    

0 Strain