Gene : Phvul.006G014100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31956:SF10 - NON-SPECIFIC PHOSPHOLIPASE C2 Genomic Order:  120
Name:  ? Phvul.006G014100 Secondary Identifier:  ? PAC:37172501
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPASYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G014100 0.5kb upstream 0.5kb upstream 11279 true Chr06: 6510897-6522175 Phaseolus vulgaris
Phvul.006G014100 0.5kb upstream 0.5kb upstream 500 false Chr06: 6521676-6522175 Phaseolus vulgaris
Phvul.006G014100 0.5kb downstream 0.5kb downstream 11279 true Chr06: 6510397-6521675 Phaseolus vulgaris
Phvul.006G014100 0.5kb downstream 0.5kb downstream 500 false Chr06: 6510397-6510896 Phaseolus vulgaris
Phvul.006G014100 1.0kb upstream 1.0kb upstream 11779 true Chr06: 6510897-6522675 Phaseolus vulgaris
Phvul.006G014100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6521676-6522675 Phaseolus vulgaris
Phvul.006G014100 1.0kb downstream 1.0kb downstream 11779 true Chr06: 6509897-6521675 Phaseolus vulgaris
Phvul.006G014100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6509897-6510896 Phaseolus vulgaris
Phvul.006G014100 2.0kb upstream 2.0kb upstream 12779 true Chr06: 6510897-6523675 Phaseolus vulgaris
Phvul.006G014100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6521676-6523675 Phaseolus vulgaris
Phvul.006G014100 2.0kb downstream 2.0kb downstream 12779 true Chr06: 6508897-6521675 Phaseolus vulgaris
Phvul.006G014100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6508897-6510896 Phaseolus vulgaris
Phvul.006G014100 5.0kb upstream 5.0kb upstream 15779 true Chr06: 6510897-6526675 Phaseolus vulgaris
Phvul.006G014100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6521676-6526675 Phaseolus vulgaris
Phvul.006G014100 5.0kb downstream 5.0kb downstream 15779 true Chr06: 6505897-6521675 Phaseolus vulgaris
Phvul.006G014100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6505897-6510896 Phaseolus vulgaris
Phvul.006G014100 10.0kb upstream 10.0kb upstream 20779 true Chr06: 6510897-6531675 Phaseolus vulgaris
Phvul.006G014100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6521676-6531675 Phaseolus vulgaris
Phvul.006G014100 10.0kb downstream 10.0kb downstream 20779 true Chr06: 6500897-6521675 Phaseolus vulgaris
Phvul.006G014100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6500897-6510896 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302706 5265 Fabidae View MSA
124069439 5270 Rosid View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.9117 0.0 130.098 High High
cufflinks 17.5313 0.0 70.4245    
cufflinks 8.05275 0.0 31.1733    
cufflinks 12.203 0.0 43.5396    
cufflinks 11.3249 0.0 40.5047    
cufflinks 8.47041 0.0 41.3674    
cufflinks 3.29014 0.0 12.7747   Low
cufflinks 4.86689 0.0 24.5686    
cufflinks 2.76162 0.0 11.9503   Low
cufflinks 118.24 0.0 566.901 High High
cufflinks 11.5485 0.0 46.0307    

0 Strain